Search result

BaseInfo

ncRNA ID	osa-miRf11466-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GCCCGUCACAGAUGACUCAUC - NA
Stem-loop(if miRNA)	C                  A         AC  - ACUAAUGCCC UAGGGC CGUCACAGAUGACUCAUC GUGACGGGC  CA U          G |||||| |||||||||||||||||| |||||||||  || | AUCCCG GCAGUGUCUACUGAGUAG CACUGCUCG  CU A          A       A                  G         GA  U CAGUAGAGUU
Stem-loop sequence	UAGGGCCCGUCACAGAUGACUCAUCAGUGACGGGCACCAUACUAAUGCCCGAUUGAGAUGACAUUCAGGCUCGUCACGGAUGAGUCAUCUGUGACGAGCCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK107543.1	ncRNA:21   CUACU--CAGUAGACACUGCCCG   1   |||||--|||||||||||||||| targets:1624   GAUGAUGGUCAUCUGUGACGGGC   1646 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK107543.1	ncRNA:21   CUACU--CAGUAGACACUGCCCG   1   |||||--|||||||||||||||| targets:1715   GAUGAUGGUCAUCUGUGACGGGC   1737 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK107543.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   ||||||||||||*|||||||| targets:1582   GAUGAGUCAUCUAUGACGGGC   1602 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK063612.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   ||||||||||||*|||||||| targets:950   GAUGAGUCAUCUCUGACGGGC   970 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK063612.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   ||*|=|||||||||||||||| targets:912   GACGGGUCAUCUGUGACGGGC   932 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK109815.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   ||||=||=||||||||||||= targets:13   GAUGGGUUAUCUGUGACGGGU   33 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-147-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015761270.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   ||||=||=||||||||||||= targets:79   GAUGGGUUAUCUGUGACGGGU   99 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA	uncharacterized LOC9270068(LOC9270068)	coding protein	psRNATarget
XM_015761270.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   |||||*||||||||||||||= targets:15   GAUGACUCAUCUGUGACGGGU   35 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA	uncharacterized LOC9270068(LOC9270068)	coding protein	psRNATarget
AK288547.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   |||*=|||||||||||||||| targets:159   GAUAGGUCAUCUGUGACGGGC   179 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   *|**||||||||||||||||| targets:3   CAGUAGUCAUCUGUGACGGGC   23 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget
AK119390.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   |||||*|||||*||||||||| targets:3076   GAUGACUCAUCAGUGACGGGC   3096 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:21   CUACUCAGUAGACACUGCCCG   1   |||||*|||||*||||||||| targets:1232   GAUGACUCAUCAGUGACGGGC   1252 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget