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BaseInfo

ncRNA ID osa-miRf11446-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACUCAUCUGUGACGGGCCCU - NA
Stem-loop(if miRNA)       A   A     A               G    -   --  UCUAUACUAAUGCC
AUUACC UAG GCCCG CACAGAUGAGUCAUC GUGA CGG  GC              C
|||||| ||| ||||| ||||||||||||||| |||| |||  ||
UAAUGG AUC CGGGC GUGUCUACUCAGUAG CACU CUC  AC              G
      C   C     A               G    G   GG  UUACAGUAGAGUUA
Stem-loop sequence AUUACCAUAGAGCCCGACACAGAUGAGUCAUCGGUGACGGGCUCUAUACUAAUGCCCGAUUGAGAUGACAUUCAGGCUCGUCACGGAUGACUCAUCUGUGACGGGCCCUACGGUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:20   UCCCGGGCAGUGUCUACUCA   1
  **||||||||||||||||*|
targets:1219   UAGGCCCGUCACAGAUGACU   1238

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK288447.1
ncRNA:20   UCCCGGGCAGUGUCUACUCA   1
  *|*|||||||||||||||||
targets:561   CGAGCCCGUCACAGAUGAGU   580

1.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
AK064906.1
ncRNA:20   UCCCGGGCAGUGUCUACUCA   1
  |**|||||||||||||||||
targets:2046   AAAGCCCGUCACAGAUGAGU   2065

2.0 Oryza sativa Japonica Group cDNA clone:J013000L21, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:20   UCCCGGGCAGUGUCUACUCA   1
  =***||||||||||||||||
targets:1453   GUCACCCGUCACAGAUGAGU   1472

3.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget