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BaseInfo

ncRNA ID osa-miRf11445-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GAUGACUCAUCUGUGACGGGCCC - NA
Stem-loop(if miRNA)       A   A     A               G    -   --  UCUAUACUAAUGCC
AUUACC UAG GCCCG CACAGAUGAGUCAUC GUGA CGG  GC              C
|||||| ||| ||||| ||||||||||||||| |||| |||  ||
UAAUGG AUC CGGGC GUGUCUACUCAGUAG CACU CUC  AC              G
      C   C     A               G    G   GG  UUACAGUAGAGUUA
Stem-loop sequence AUUACCAUAGAGCCCGACACAGAUGAGUCAUCGGUGACGGGCUCUAUACUAAUGCCCGAUUGAGAUGACAUUCAGGCUCGUCACGGAUGACUCAUCUGUGACGGGCCCUACGGUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:23   CCCGGGCAGUGUCUACUCAGUAG   1
  *||||||||||||||||*|||||
targets:1220   AGGCCCGUCACAGAUGACUCAUC   1242

1.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:23   CCCGGGCAGUGUCUACUCAGUAG   1
  ***||||||||||||||||||||
targets:1454   UCACCCGUCACAGAUGAGUCAUC   1476

0.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget
AK241950.1
ncRNA:23   CCCGGGCAGUGUCUACUCAGUAG   1
  ***||||||||||||||*|||||
targets:1029   AAACCCGUCACAGAUGACUCAUC   1051

1.5 Oryza sativa Japonica Group cDNA, clone: J075091F02, full insert sequence NA coding protein psRNATarget
XM_015775391.1
ncRNA:23   CCCGGGCA-GUGUCUACUCAGUAG   1
  ***=||||-||||||||||||||*
targets:52   UCAUCCGUGCACAGAUGAGUCAUG   75

3.0 PREDICTED: Oryza sativa Japonica Group protein LURP-one-related 6 (LOC4331823), mRNA protein LURP-one-related 6(LOC4331823) coding protein psRNATarget