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BaseInfo

ncRNA ID	osa-miRf11443-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CACGGGAUAAUCGAUUAUCC - NA
Stem-loop(if miRNA)	G    UUG   A                CGCCC            GCU  UCAUCUGGGA CCG GCGG   GAU GAUUAUCCCGUGCGGU     GGCCCGCCUGCA   CC          A ||| ||||   ||| ||||||||||||||||     ||||||||||||   || GGC UGCC   UUA CUAAUAGGGCACGCUA     CCGGGCGGGCGU   CU          A    G    CUA   G                ----A            GCA  UUCAUUUCUA
Stem-loop sequence	CCGGGCGGUUGGAUAGAUUAUCCCGUGCGGUCGCCCGGCCCGCCUGCAGCUCCUCAUCUGGGAAAAUCUUUACUUUCACGUGCGGGCGGGCCAAUCGCACGGGAUAAUCGAUUAUCCCGUGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK062334.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   |||||||||||||||||||| targets:564   GGAUAAUCGAUUAUCCCGUG   583 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-101-E02, full insert sequence	NA	coding protein	psRNATarget
CT829388.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   |||||||||||||||||||| targets:672   GGAUAAUCGAUUAUCCCGUG   691 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA016C04, full insert sequence	NA	coding protein	psRNATarget
AK063216.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   |||||||||||||||||||| targets:686   GGAUAAUCGAUUAUCCCGUG   705 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence	NA	coding protein	psRNATarget
AK068539.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   |||||||||||||||||||| targets:568   GGAUAAUCGAUUAUCCCGUG   587 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013151E13, full insert sequence	NA	coding protein	psRNATarget
XM_015773199.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   |||||||||||||||||||| targets:705   GGAUAAUCGAUUAUCCCGUG   724 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333700 (LOC4333700), mRNA	uncharacterized LOC4333700(LOC4333700)	coding protein	psRNATarget
CT835270.1	ncRNA:20   CCUAUUAGCUAAUAGGGCAC   1   ||||||||||||||||*||| targets:568   GGAUAAUCGAUUAUCCAGUG   587 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B09, full insert sequence	NA	coding protein	psRNATarget