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BaseInfo

ncRNA ID osa-miRf11441-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UGCACCACCGGCUGAAUUGGUGGU - NA
Stem-loop(if miRNA)      -U          C G A          CU    UG UG  U   C
CCGGC  GCACCACCGG U A UUGGUGGUGU  GCUG  C  GC GUA G
|||||  |||||||||| | | ||||||||||  ||||  |  || ||| A
GGUCG  CGUGGUGGUU A U GGCCACCACG  CGGC  G  UG CGU C
     UC          A G C          -U    CA GU  U   C
Stem-loop sequence CCGGCUGCACCACCGGCUGAAUUGGUGGUGUCUGCUGUGCUGGCUGUACGACCUGCUGUUGGACCGGCUGCACCACCGGCUGAAUUGGUGGUGCCUGCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK108782.1
ncRNA:24   UGGUGGUUAAGUCGGCCACCACGU   1
  =|==|*||||||*|||||||||||
targets:481   GCUGCAAAUUCAACCGGUGGUGCA   504

2.5 Oryza sativa Japonica Group cDNA clone:002-151-A06, full insert sequence NA coding protein psRNATarget
XM_015779956.1
ncRNA:24   UGGUGGUUAAGUCGGCCACCACGU   1
  =|==|*||||||*|||||||||||
targets:7850   GCUGCAAAUUCAACCGGUGGUGCA   7873

2.5 PREDICTED: Oryza sativa Japonica Group BEACH domain-containing protein C2 (LOC4336621), mRNA BEACH domain-containing protein C2(LOC4336621) coding protein psRNATarget