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BaseInfo

ncRNA ID osa-miRf11436-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GCGCUGAACAUAGACACUUCAAC - NA
Stem-loop(if miRNA)          A        CA               CACGUCAAU  A         ------   -- GCUACCACGGAU
AAAUCAUGU GCGCUGAA  UAGACACUUCAACGC         UG CGCUGAAUG      CCG  U            G
||||||||| ||||||||  |||||||||||||||         || |||||||||      |||  |            A
UUUAGUACA CGCGACUU  AUCUGUGGAGUUGUG         AC GCGAUUUAC      CCG  C            A
         C        AA               AUUUAUCAU  C         AAGUAA   UG GACUGAAUCGGA
Stem-loop sequence AAAUCAUGUAGCGCUGAACAUAGACACUUCAACGCCACGUCAAUUGACGCUGAAUGCCGUGCUACCACGGAUGAAAGGCUAAGUCAGCGUGCCAAUGAACAUUUAGCGCCAUACUAUUUAGUGUUGAGGUGUCUAAAUUCAGCGCCACAUGAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015770638.1
ncRNA:23   CAACUUCACAGAUACAAGUCGCG   1
  |||||=|||||||*|||||||||
targets:505   GUUGAGGUGUCUAAGUUCAGCGC   527

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA uncharacterized LOC4329649(LOC4329649) coding protein psRNATarget
XM_015770637.1
ncRNA:23   CAACUUCACAGAUACAAGUCGCG   1
  |||||=|||||||*|||||||||
targets:505   GUUGAGGUGUCUAAGUUCAGCGC   527

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA uncharacterized LOC4329649(LOC4329649) coding protein psRNATarget
CT837884.1
ncRNA:23   CAACUUCACAGAUACAAGUCGCG   1
  |*|||=|||||||*|||||||||
targets:933   GCUGAGGUGUCUAAGUUCAGCGC   955

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence NA coding protein psRNATarget
AK241139.1
ncRNA:23   CAACUUCACAGAUACAAGUCGCG   1
  |*|||=|||||||*|||||||||
targets:928   GCUGAGGUGUCUAAGUUCAGCGC   950

2.5 Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence NA coding protein psRNATarget
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