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BaseInfo

ncRNA ID osa-miRf11419-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGGGUUAAGCGUGCUUGGCC - NA
Stem-loop(if miRNA)     CA                    -A    AA      -   G   GGACA   GGACGUGGCCGAGAGGGGACGU
ACUC  GGGUUAAGCGUGCUUGGCCU  GAGU  UUUUGG GAU GGU     CAC                      U
||||  ||||||||||||||||||||  ||||  |||||| ||| |||     |||
UGAG  UCCGGUUCGUGCGAAUUGGG  CUCA  GAAACC CUA CCG     GGC                      C
    -A                    AC    -A      U   G   ---AA   CUUUUCUUCAACGUUGAACAAC
Stem-loop sequence ACUCCAGGGUUAAGCGUGCUUGGCCUAGAGUAAUUUUGGGAUGGGUGGACACACGGACGUGGCCGAGAGGGGACGUUCCAACAAGUUGCAACUUCUUUUCCGGAAGCCGAUCUCCAAAGAACUCCAGGGUUAAGCGUGCUUGGCCUAGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288940.1
ncRNA:20   CCGGUUCGUGCGAAUUGGGA   1
  ||||||||||||||||||=|
targets:2265   GGCCAAGCACGCUUAACCUU   2284

1.5 Oryza sativa Japonica Group cDNA, clone: J090083A19, full insert sequence NA coding protein psRNATarget