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BaseInfo

ncRNA ID	osa-miRf11414-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UCGUGAUGACGUGGACGAAU - NA
Stem-loop(if miRNA)	A                GUAGG     AAAUUUUACUGGGAGUA GGCUGAGAUUCGUUCACGUCAUCAC AGUUAAAAUUUAACUC     AGUAA                 A ||||||||||||||||||||||||| ||||||||||||||||     |||||                 A CCGACUCUAAGCAGGUGCAGUAGUG UCAAUUUUAAAUUGAG     UCAUU                 A                          C                ----G     UUAAAAUUGAGGACGUU
Stem-loop sequence	GGCUGAGAUUCGUUCACGUCAUCACAAGUUAAAAUUUAACUCGUAGGAGUAAAAAUUUUACUGGGAGUAAAAUUGCAGGAGUUAAAAUUUUACUGGAGUUAAAUUUUAACUCGUGAUGACGUGGACGAAUCUCAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164718.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||||=||||||||||||| targets:66   AUUCGUUCACGUCAUCACGA   85 Target Full Sequence	1.0	Sequence 2382 from Patent EP2559767	NA	coding protein	psRNATarget
HI404257.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||||=||||||||||||| targets:66   AUUCGUUCACGUCAUCACGA   85 Target Full Sequence	1.0	Sequence 2382 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236387.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||||=||||||||||||| targets:66   AUUCGUUCACGUCAUCACGA   85 Target Full Sequence	1.0	Sequence 2382 from Patent EP2985353	NA	coding protein	psRNATarget
LQ236317.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||||||||||||| targets:1   UUCGUCCACGUCAUCACGA   19 Target Full Sequence	0.0	Sequence 2312 from Patent EP2985353	NA	coding protein	psRNATarget
HI404187.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||||||||||||| targets:1   UUCGUCCACGUCAUCACGA   19 Target Full Sequence	0.0	Sequence 2312 from Patent EP2074227	NA	coding protein	psRNATarget
JB164648.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||||||||||||| targets:1   UUCGUCCACGUCAUCACGA   19 Target Full Sequence	0.0	Sequence 2312 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015790976.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=|||||=|||||||||| targets:3626   AUUUGUCCAUGUCAUCACGA   3645 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4344388 (LOC4344388), transcript variant X2, mRNA	uncharacterized LOC4344388(LOC4344388)	coding protein	psRNATarget
XM_015790977.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=|||||=|||||||||| targets:3279   AUUUGUCCAUGUCAUCACGA   3298 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4344388 (LOC4344388), transcript variant X3, mRNA	uncharacterized LOC4344388(LOC4344388)	coding protein	psRNATarget
XM_015755327.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||=||||||||||||| targets:1494   AUUUGUUCACGUCAUCACGA   1513 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable cinnamyl alcohol dehydrogenase 8D (LOC4346993), mRNA	probable cinnamyl alcohol dehydrogenase 8D(LOC4346993)	coding protein	psRNATarget
AK243022.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||=||||||||||||| targets:1330   AUUUGUUCACGUCAUCACGA   1349 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J100001E20, full insert sequence	NA	coding protein	psRNATarget
CT835866.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||=||||||||||||| targets:199   AUUUGUUCACGUCAUCACGA   218 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI027A04, full insert sequence	NA	coding protein	psRNATarget
JB164993.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||=|||||||||||||||| targets:1   UUUGUCCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2657 from Patent EP2559767	NA	coding protein	psRNATarget
HI404532.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||=|||||||||||||||| targets:1   UUUGUCCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2657 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236662.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||=|||||||||||||||| targets:1   UUUGUCCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2657 from Patent EP2985353	NA	coding protein	psRNATarget
JB164719.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   |||||=||||||||||||| targets:1   UUCGUUCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2383 from Patent EP2559767	NA	coding protein	psRNATarget
HI404258.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   |||||=||||||||||||| targets:1   UUCGUUCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2383 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236388.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   |||||=||||||||||||| targets:1   UUCGUUCACGUCAUCACGA   19 Target Full Sequence	1.0	Sequence 2383 from Patent EP2985353	NA	coding protein	psRNATarget
LQ236275.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||=|||||||||| targets:1   UUCGUCCAUGUCAUCACGA   19 Target Full Sequence	1.5	Sequence 2270 from Patent EP2985353	NA	coding protein	psRNATarget
JB164606.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||=|||||||||| targets:1   UUCGUCCAUGUCAUCACGA   19 Target Full Sequence	1.5	Sequence 2270 from Patent EP2559767	NA	coding protein	psRNATarget
HI404145.1	ncRNA:19   AAGCAGGUGCAGUAGUGCU   1   ||||||||=|||||||||| targets:1   UUCGUCCAUGUCAUCACGA   19 Target Full Sequence	1.5	Sequence 2270 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015771677.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||*|||||||||||=||| targets:1572   AUUCAUCCACGUCAUCGCGA   1591 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein disulfide isomerase-like 5-3 (LOC4329624), mRNA	protein disulfide isomerase-like 5-3(LOC4329624)	coding protein	psRNATarget
JB164823.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||||||||||||||*| targets:15   AUUUGUCCACGUCAUCACAA   34 Target Full Sequence	2.5	Sequence 2487 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236492.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||||||||||||||*| targets:15   AUUUGUCCACGUCAUCACAA   34 Target Full Sequence	2.5	Sequence 2487 from Patent EP2985353	NA	coding protein	psRNATarget
HI404362.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   |||=||||||||||||||*| targets:15   AUUUGUCCACGUCAUCACAA   34 Target Full Sequence	2.5	Sequence 2487 from Patent EP2074227	NA	coding protein	psRNATarget
AK288313.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||*|||||||||||||*| targets:3572   AUUCAUCCACGUCAUCACAA   3591 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090021D10, full insert sequence	NA	coding protein	psRNATarget
LQ236432.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||*||*|||||||||||| targets:17   AUUCAUCAACGUCAUCACGA   36 Target Full Sequence	2.5	Sequence 2427 from Patent EP2985353	NA	coding protein	psRNATarget
HI404302.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||*||*|||||||||||| targets:17   AUUCAUCAACGUCAUCACGA   36 Target Full Sequence	2.5	Sequence 2427 from Patent EP2074227	NA	coding protein	psRNATarget
JB164763.1	ncRNA:20   UAAGCAGGUGCAGUAGUGCU   1   ||||*||*|||||||||||| targets:17   AUUCAUCAACGUCAUCACGA   36 Target Full Sequence	2.5	Sequence 2427 from Patent EP2559767	NA	coding protein	psRNATarget