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BaseInfo

ncRNA ID osa-miRf11402-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GUAGGACUUGGAGAUAUCGGAC - NA
Stem-loop(if miRNA)      --A           -         CCA       CCUUUUAU   
GUGAG   UUCGAUGUCUU AGGUCCUAC   GGGGGUC        ACCG
|||||   ||||||||||| |||||||||   |||||||        |||C
CACUC   AGGCUAUAGAG UUCAGGAUG   CCUCUAG        UGGG
     CUC           G         -AA       ---UUGAC   
Stem-loop sequence GUGAGAUUCGAUGUCUUAGGUCCUACCCAGGGGGUCCCUUUUAUACCGCGGGUCAGUUGAUCUCCAAGUAGGACUUGGAGAUAUCGGACUCCUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015793139.1
ncRNA:22   CAGGCUAUAGAGGUUCAGGAUG   1
  |||||||||||||=||||||||
targets:902   GUCCGAUAUCUCCGAGUCCUAC   923

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276863 (LOC107276863), mRNA uncharacterized LOC107276863(LOC107276863) coding protein psRNATarget
AK288799.1
ncRNA:22   CAGGCUAUAGAGGUUCAGGAUG   1
  |||||||||||||=||||||||
targets:4789   GUCCGAUAUCUCCGAGUCCUAC   4810

1.5 Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence NA coding protein psRNATarget