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BaseInfo

ncRNA ID	osa-miRf11400-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CCCACAAGUGGAGCUAUAGG - NA
Stem-loop(if miRNA)	AUGA                             --AACC  UU CUG    ACCCACAAGUGGAGCUAUAGGUCCAGCUU      CC  C |||    |||||||||||||||||||||||||||||      ||  A GAU    UGGGUGUUCACCUCGAUAUCCAGGUUGAG      GG  G    ---G                             CAUAUC  CU
Stem-loop sequence	CUGAUGAACCCACAAGUGGAGCUAUAGGUCCAGCUUAACCCCUUCAGUCGGCUAUACGAGUUGGACCUAUAGCUCCACUUGUGGGUGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK100211.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||||||| targets:1460   CCUACAGCUCCACUUGUGGG   1479 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023043L04, full insert sequence	NA	coding protein	psRNATarget
AK100211.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   =|||*||||||||||||||| targets:1526   UCUACAGCUCCACUUGUGGG   1545 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023043L04, full insert sequence	NA	coding protein	psRNATarget
CT828627.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:537   CCUACAGCUCCACUUAUGGG   556 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN050F08, full insert sequence	NA	coding protein	psRNATarget
XM_015782695.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:625   CCUACAGCUCCACUUAUGGG   644 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338074 (LOC4338074), transcript variant X6, mRNA	uncharacterized LOC4338074(Os05g0206300)	coding protein	psRNATarget
XM_015782693.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:630   CCUACAGCUCCACUUAUGGG   649 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338074 (LOC4338074), transcript variant X4, mRNA	uncharacterized LOC4338074(Os05g0206300)	coding protein	psRNATarget
XM_015782694.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:645   CCUACAGCUCCACUUAUGGG   664 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338074 (LOC4338074), transcript variant X5, mRNA	uncharacterized LOC4338074(Os05g0206300)	coding protein	psRNATarget
AK071166.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:1346   CCUACAGCUCCACUUAUGGG   1365 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023079L10, full insert sequence	NA	coding protein	psRNATarget
XM_015782692.1	ncRNA:20   GGAUAUCGAGGUGAACACCC   1   ||||*||||||||||*|||| targets:1396   CCUACAGCUCCACUUAUGGG   1415 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338074 (LOC4338074), transcript variant X1, mRNA	uncharacterized LOC4338074(Os05g0206300)	coding protein	psRNATarget