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BaseInfo

ncRNA ID	ath-miRf10188-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAUGAUCCGUCACGAUGUGGU - NA
Stem-loop(if miRNA)	G         - CG          G U  C   A  AGA     UGAU  U   -    AA      CA U GUU GAUCGCAUC U  UGGAUCGUUU A GG UAG GG   UACUG    UG UGU UGAU  UUUCUU  C G ||| ||||||||| |  |||||||||| | || ||| ||   |||||    || ||| ||||  ||||||  | G CGA UUGGUGUAG A  GCCUAGUAGA U UC AUC CC   AUGAC    AC ACG AUUG  AGAGAA  G A    G         C CU          G U  A   -  --A     -UUU  C   U    CA      AG A
Stem-loop sequence	GUUGGAUCGCAUCUCGUGGAUCGUUUGAUGGCUAGAGGAGAUACUGUGAUUGUUGUUGAUAAUUUCUUCACUGGAAGGAAAGAGAACGUUAUGCACCAUUUCAGUAACCCUAACUUUGAGAUGAUCCGUCACGAUGUGGUUGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_111965.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   |||||||*||||=|||||||| targets:1049   ACCACAUAGUGAUGGAUCAUC   1069 Target Full Sequence	2.5	Arabidopsis thaliana Myb/SANT-like DNA-binding domain protein partial mRNA	Myb/SANT-like DNA-binding domain protein(AT3G11310)	coding protein	psRNATarget
AK228936.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:467   ACGAUAUUGUGACGGAUCAUC   487 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for putative pectinacetylesterase protein, complete cds, clone: RAFL16-24-N19	NA	coding protein	psRNATarget
NM_001203841.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:589   ACGAUAUUGUGACGGAUCAUC   609 Target Full Sequence	3.0	Arabidopsis thaliana Pectinacetylesterase family protein mRNA	Pectinacetylesterase family protein(AT4G19410)	coding protein	psRNATarget
NM_118061.3	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:486   ACGAUAUUGUGACGGAUCAUC   506 Target Full Sequence	3.0	Arabidopsis thaliana Pectinacetylesterase family protein mRNA	Pectinacetylesterase family protein(AT4G19410)	coding protein	psRNATarget
AK222036.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:494   ACGAUAUUGUGACGGAUCAUC   514 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for putative pectinacetylesterase protein, complete cds, clone: RAFL22-74-B18	NA	coding protein	psRNATarget
AY087371.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:463   ACGAUAUUGUGACGGAUCAUC   483 Target Full Sequence	3.0	Arabidopsis thaliana clone 34674 mRNA, complete sequence	NA	coding protein	psRNATarget
AY054531.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:417   ACGAUAUUGUGACGGAUCAUC   437 Target Full Sequence	3.0	Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds	NA	coding protein	psRNATarget
BX826511.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:408   ACGAUAUUGUGACGGAUCAUC   428 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY064626.1	ncRNA:21   UGGUGUAGCACUGCCUAGUAG   1   ||*|=||=||||||||||||| targets:354   ACGAUAUUGUGACGGAUCAUC   374 Target Full Sequence	3.0	Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds	NA	coding protein	psRNATarget