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BaseInfo

ncRNA ID	osa-miRf11395-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CCGGUCUGACCGGUCCACAU - NA
Stem-loop(if miRNA)	GACACA    C              CA    ----GC       U     C  AU       GUGU GGCCGGUCAGACCG  GGCU      GCCGGUC GACCG GC  U       |||| ||||||||||||||  ||||      ||||||| ||||| ||  A       UACA CUGGCCAGUCUGGC  CCGA      CGGCCAG CUGGC CG  C CUAAAA    C              --    GACCAU       U     -  CA
Stem-loop sequence	GACACAGUGUCGGCCGGUCAGACCGCAGGCUGCGCCGGUCUGACCGCGCAUUACACGCCGGUCUGACCGGCUACCAGAGCCCGGUCUGACCGGUCCACAUAAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK103228.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   |||||||||||||||||||| targets:3677   AUGUGGACCGGUCAGACCGG   3696 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J033123C21, full insert sequence	NA	coding protein	psRNATarget
JB164370.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   ||||||*||||||||||||| targets:4   AUGUGGUCCGGUCAGACCGG   23 Target Full Sequence	1.0	Sequence 2034 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236039.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   ||||||*||||||||||||| targets:4   AUGUGGUCCGGUCAGACCGG   23 Target Full Sequence	1.0	Sequence 2034 from Patent EP2985353	NA	coding protein	psRNATarget
HI403909.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   ||||||*||||||||||||| targets:4   AUGUGGUCCGGUCAGACCGG   23 Target Full Sequence	1.0	Sequence 2034 from Patent EP2074227	NA	coding protein	psRNATarget
AK109944.1	ncRNA:20   UACAC-CUGGCCAGUCUGGCC   1   *||||-||||||||||||||| targets:975   UUGUGUGACCGGUCAGACCGG   995 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-154-G12, full insert sequence	NA	coding protein	psRNATarget
XM_015786113.1	ncRNA:20   UACAC-CUGGCCAGUCUGGCC   1   *||||-||||||||||||||| targets:1071   UUGUGUGACCGGUCAGACCGG   1091 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group isoflavone reductase-like protein (LOC9269586), mRNA	isoflavone reductase-like protein(LOC9269586)	coding protein	psRNATarget
XM_015782610.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   *|||||*||||||||||||| targets:2159   UUGUGGUCCGGUCAGACCGG   2178 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280869 (LOC107280869), transcript variant X2, mRNA	uncharacterized LOC107280869(LOC107280869)	coding protein	psRNATarget
XM_015782611.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   *|||||*||||||||||||| targets:2181   UUGUGGUCCGGUCAGACCGG   2200 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280869 (LOC107280869), transcript variant X3, mRNA	uncharacterized LOC107280869(LOC107280869)	coding protein	psRNATarget
XM_015763386.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   =|*|||||||||||||=||| targets:535   GUUUGGACCGGUCAGAUCGG   554 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 42-like (LOC107277806), transcript variant X3, mRNA	protein DETOXIFICATION 42-like(LOC107277806)	coding protein	psRNATarget
XM_015763385.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   =|*|||||||||||||=||| targets:540   GUUUGGACCGGUCAGAUCGG   559 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 42-like (LOC107277806), transcript variant X2, mRNA	protein DETOXIFICATION 42-like(LOC107277806)	coding protein	psRNATarget
XM_015763384.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   =|*|||||||||||||=||| targets:657   GUUUGGACCGGUCAGAUCGG   676 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 42-like (LOC107277806), transcript variant X1, mRNA	protein DETOXIFICATION 42-like(LOC107277806)	coding protein	psRNATarget
XM_015780193.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   *||*||=||||||||||||| targets:726   UUGAGGGCCGGUCAGACCGG   745 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280758 (LOC107280758), transcript variant X2, mRNA	uncharacterized LOC107280758(LOC107280758)	coding protein	psRNATarget
AK288532.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   =|||*|=||||||||||||* targets:414   GUGUUGGCCGGUCAGACCGC   433 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090045D07, full insert sequence	NA	coding protein	psRNATarget
AK288485.1	ncRNA:20   UACACCUGGCCAGUCUGGCC   1   =|||*|=||||||||||||* targets:2409   GUGUCGGCCGGUCAGACCGC   2428 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090040E08, full insert sequence	NA	coding protein	psRNATarget
LQ236650.1	ncRNA:20   UAC-ACCUGGCCAGUCUGGCC   1   *||-|||*||||||||||||| targets:44   CUGAUGGCCCGGUCAGACCGG   64 Target Full Sequence	3.0	Sequence 2645 from Patent EP2985353	NA	coding protein	psRNATarget
JB164981.1	ncRNA:20   UAC-ACCUGGCCAGUCUGGCC   1   *||-|||*||||||||||||| targets:44   CUGAUGGCCCGGUCAGACCGG   64 Target Full Sequence	3.0	Sequence 2645 from Patent EP2559767	NA	coding protein	psRNATarget
HI404520.1	ncRNA:20   UAC-ACCUGGCCAGUCUGGCC   1   *||-|||*||||||||||||| targets:44   CUGAUGGCCCGGUCAGACCGG   64 Target Full Sequence	3.0	Sequence 2645 from Patent EP2074227	NA	coding protein	psRNATarget