ncRNA ID | osa-miRf11393-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - CUCAGCGCCAUUGACCUUGGCGCU - NA |
Stem-loop(if miRNA) |
  GU      ---          UUGACC        A      --------    UUU        AC    CUC AG  CGUUGA   CUCAGCGCCA      UUGGCGCU AGCUAU        AACG   UAGCGCCA  CUCG   U ||  ||||||   ||||||||||      |||||||| ||||||        ||||   ||||||||  |||| UU  GCAACU   GAGUCGCGGU      AACCGCGA UCGAUA        UUGC   AUUGCGGU  GAGC   A   UG      CUG          UCAAUA        C      CUACUGAG    UUU        -A    CUA |
Stem-loop sequence | AGGUCGUUGACUCAGCGCCAUUGACCUUGGCGCUAAGCUAUAACGUUUUAGCGCCAACCUCGCUCUAAUCCGAGAUGGCGUUAUUUCGUUGAGUCAUCAUAGCUCAGCGCCAAAUAACUUGGCGCUGAGGUCUCAACGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JB164544.1 |
|
1.0 | Sequence 2208 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ236213.1 |
|
1.0 | Sequence 2208 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI404083.1 |
|
1.0 | Sequence 2208 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
XM_015774796.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277759 (LOC107277759), mRNA | uncharacterized LOC107277759(LOC107277759) | coding protein | psRNATarget |