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BaseInfo

ncRNA ID osa-miRf11393-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CUCAGCGCCAUUGACCUUGGCGCU - NA
Stem-loop(if miRNA)   GU      ---          UUGACC        A      --------    UUU        AC    CUC
AG  CGUUGA   CUCAGCGCCA      UUGGCGCU AGCUAU        AACG   UAGCGCCA  CUCG   U
||  ||||||   ||||||||||      |||||||| ||||||        ||||   ||||||||  ||||
UU  GCAACU   GAGUCGCGGU      AACCGCGA UCGAUA        UUGC   AUUGCGGU  GAGC   A
  UG      CUG          UCAAUA        C      CUACUGAG    UUU        -A    CUA
Stem-loop sequence AGGUCGUUGACUCAGCGCCAUUGACCUUGGCGCUAAGCUAUAACGUUUUAGCGCCAACCUCGCUCUAAUCCGAGAUGGCGUUAUUUCGUUGAGUCAUCAUAGCUCAGCGCCAAAUAACUUGGCGCUGAGGUCUCAACGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164544.1
ncRNA:24   UCGCGGUUCCAGUUACCGCGACUC   1
  ||||||||*|||||||||||||||
targets:129   AGCGCCAAAGUCAAUGGCGCUGAG   152

1.0 Sequence 2208 from Patent EP2559767 NA coding protein psRNATarget
LQ236213.1
ncRNA:24   UCGCGGUUCCAGUUACCGCGACUC   1
  ||||||||*|||||||||||||||
targets:129   AGCGCCAAAGUCAAUGGCGCUGAG   152

1.0 Sequence 2208 from Patent EP2985353 NA coding protein psRNATarget
HI404083.1
ncRNA:24   UCGCGGUUCCAGUUACCGCGACUC   1
  ||||||||*|||||||||||||||
targets:129   AGCGCCAAAGUCAAUGGCGCUGAG   152

1.0 Sequence 2208 from Patent EP2074227 NA coding protein psRNATarget
XM_015774796.1
ncRNA:24   UCGCGGUUCCAGUUACCGCGACUC   1
  **|||||**||||||||||||||*
targets:445   CACGCCAUCGUCAAUGGCGCUGAU   468

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277759 (LOC107277759), mRNA uncharacterized LOC107277759(LOC107277759) coding protein psRNATarget