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BaseInfo

ncRNA ID	osa-miRf11390-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CACCGUCGUCGCUGCCACAC - NA
Stem-loop(if miRNA)	AAG  U          G       A   C AUGAUGAA    -A  -     GA  GAUAAAUCA CCAC   UC CACCGUCGUC CUGCCAC CGC G        UUCU  GG GCUUG  GU         U ||||   || |||||||||| ||||||| ||| |        ||||  || |||||  ||         A GGUG   AG GUGGCAGCGG GGCGGUG GUG C        AGGA  UC CGAGC  CC         G     ---  -          A       -   A --GAGGGG    AG  A     AA  GAAGGAGGG
Stem-loop sequence	CCACAAGUCUCACCGUCGUCGCUGCCACACGCCGAUGAUGAAUUCUAGGGCUUGGAGUGAUAAAUCAUAGGGGAGGAAGCCAACGAGCACUGAAGGAGGGGAGCAGUGGUGGCGGAGGCGACGGUGGAGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015790526.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   *||*|||||||||||||||| targets:132   CUGCGGCAGCGACGACGGUG   151 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group ankyrin repeat-containing protein At5g02620-like (LOC107281631), mRNA	ankyrin repeat-containing protein At5g02620-like(LOC107281631)	coding protein	psRNATarget
AK110457.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   |*||*||||||||||||||| targets:2657   GCGUCGCAGCGACGACGGUG   2676 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-166-F05, full insert sequence	NA	coding protein	psRNATarget
XM_015782638.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   *||*|||=|||||||||||| targets:458   AUGCGGCGGCGACGACGGUG   477 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable WRKY transcription factor 47 (LOC107276141), transcript variant X1, mRNA	probable WRKY transcription factor 47(LOC107276141)	coding protein	psRNATarget
XM_015782639.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   *||*|||=|||||||||||| targets:455   AUGCGGCGGCGACGACGGUG   474 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable WRKY transcription factor 47 (LOC107276141), transcript variant X2, mRNA	probable WRKY transcription factor 47(LOC107276141)	coding protein	psRNATarget
AK287664.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   **||||||||||||||*||| targets:1314   CGGUGGCAGCGACGACUGUG   1333 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065114D10, full insert sequence	NA	coding protein	psRNATarget
AK288490.1	ncRNA:20   CACACCGUCGCUGCUGCCAC   1   **||||||||||||||*||| targets:2008   CGGUGGCAGCGACGACUGUG   2027 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090040J04, full insert sequence	NA	coding protein	psRNATarget