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BaseInfo

ncRNA ID	osa-miRf11389-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GCGAAAAUCGGAUUUUCGCGUGCGG - NA
Stem-loop(if miRNA)	UUU    UG  - UC  A G               -A  --     CCCGUCUGGAGCAGUACGUCU AGGU   CCCG  CG G  AA C GAUUUUCGCGUGCGG  GC  UUCAG                     G ||||   ||||  || |  || | |||||||||||||||  ||  |||||                     C UUCG   GGGC  GC C  UU G CUAAAAGCGCACGCC  CG  GCGGG                     A     --U    GU  G UU  A G               AA  CG     CGUGCGUGUUUAUCGCUAAAA
Stem-loop sequence	AGGUUUUCCCGUGCGGUCAAACGGAUUUUCGCGUGCGGAGCUUCAGCCCGUCUGGAGCAGUACGUCUGCAAAAAUCGCUAUUUGUGCGUGCGGGCGGCGCAACCGCACGCGAAAAUCGGAUUUUCGCGUGCGGGUGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241209.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   ||||||||||||||||||||||||| targets:679   CCGCACGCGAAAAUCCGAUUUUCGC   703 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065122J15, full insert sequence	NA	coding protein	psRNATarget
JB164971.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2635 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236357.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2352 from Patent EP2985353	NA	coding protein	psRNATarget
HI404227.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2352 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236640.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2635 from Patent EP2985353	NA	coding protein	psRNATarget
HI404510.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2635 from Patent EP2074227	NA	coding protein	psRNATarget
JB164688.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||||||||||||*||||||||| targets:18   CCGCACGCGAAAAUCGGAUUUUCGC   42 Target Full Sequence	1.5	Sequence 2352 from Patent EP2559767	NA	coding protein	psRNATarget
AK109653.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   |||||=|||||||||*||||||||| targets:608   CCGCAUGCGAAAAUCAGAUUUUCGC   632 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-140-D12, full insert sequence	NA	coding protein	psRNATarget
AK288453.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   ||||||*||=||||||||||||||| targets:3797   CCGCACACGGAAAUCCGAUUUUCGC   3821 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090034P19, full insert sequence	NA	coding protein	psRNATarget
AK064746.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   ||*||||||||||||*||||||||| targets:497   CCACACGCGAAAAUCAGAUUUUCGC   521 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-120-E06, full insert sequence	NA	coding protein	psRNATarget
HI404303.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   *|||*=|=|||||||=||||||||| targets:21   GCGCUUGUGAAAAUCUGAUUUUCGC   45 Target Full Sequence	2.5	Sequence 2428 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236433.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   *|||*=|=|||||||=||||||||| targets:21   GCGCUUGUGAAAAUCUGAUUUUCGC   45 Target Full Sequence	2.5	Sequence 2428 from Patent EP2985353	NA	coding protein	psRNATarget
JB164764.1	ncRNA:25   GGCGUGCGCUUUUAGGCUAAAAGCG   1   *|||*=|=|||||||=||||||||| targets:21   GCGCUUGUGAAAAUCUGAUUUUCGC   45 Target Full Sequence	2.5	Sequence 2428 from Patent EP2559767	NA	coding protein	psRNATarget