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BaseInfo

ncRNA ID osa-miRf11387-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - GCCAGCGAAGAUCCAUUUUCGCUGG - NA
Stem-loop(if miRNA)   GU            G  UGC         A   G   UCU
GG  CGCUAGCGAAAA GG   AUCUUCGCU GCG UCC   U
||  |||||||||||| ||   ||||||||| ||| |||   A
CC  GCGGUCGCUUUU CC   UAGAAGCGA CGC AGG   A
  UG            A  ---         C   -   UCC
Stem-loop sequence GGGUCGCUAGCGAAAAGGGUGCAUCUUCGCUAGCGGUCCUCUUAACCUGGACGCCAGCGAAGAUCCAUUUUCGCUGGCGGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288518.1
ncRNA:25   GGUCGCUUUUACCUAGAAGCGACCG   1
  ||||||||||||||||||=||||||
targets:1114   CCAGCGAAAAUGGAUCUUUGCUGGC   1138

1.5 Oryza sativa Japonica Group cDNA, clone: J090043E02, full insert sequence NA coding protein psRNATarget
AK119400.1
ncRNA:25   GGUCGCUUUUACCUAGAAGCGACCG   1
  =|||*||||||||||||*|||||||
targets:3262   UCAGAGAAAAUGGAUCUACGCUGGC   3286

1.5 Oryza sativa Japonica Group cDNA clone:001-132-E01, full insert sequence NA coding protein psRNATarget
AK073678.1
ncRNA:25   GGUCGCUUUUACCUAGAAGCGACCG   1
  ||||=*|||||*|||=|||||||||
targets:1130   CCAGUAAAAAUUGAUUUUCGCUGGC   1154

2.5 Oryza sativa Japonica Group cDNA clone:J033050J03, full insert sequence NA coding protein psRNATarget