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BaseInfo

ncRNA ID	osa-miRf11382-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GUGUCCAACGUUCGACUGUCCGU - NA
Stem-loop(if miRNA)	-              GUUC          C    U     --AAG      -------------AAAAAAUAAAAA  CAAGUCACGCAUAA CUGG UUUCUGUGUCCAAC    GACUGUCCGU UUAU UGAAA     UUAUGA                         GA              A |||| ||||||||||||||    |||||||||| |||| |||||     ||||||                         ||              A GACC AAAGGCACAGGUUG    CUGACAGGCA AAUA ACUUU     AAUAUU                         UA              U     U              -AAA          A    U     AAAAA      AAACAUAAAAAUAACAACAAUCUAA  UUUUGUACUAAUUA
Stem-loop sequence	CUGGUUUCUGUGUCCAACGUUCGACUGUCCGUCUUAUUUGAAAAAGUUAUGAAAAAAAUAAAAAGACAAGUCACGCAUAAAAUAUUAAUCAUGUUUUAUAAUCUAACAACAAUAAAAAUACAAAUUAUAAAAAAAUUUCAUAUAAAACGGACAGUCAAAGUUGGACACGGAAAUCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK108746.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   ||||||=|||*|||||||||||| targets:1440   ACGGACGGUCAAACGUUGGACAC   1462 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-150-E12, full insert sequence	NA	coding protein	psRNATarget
AK288706.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   ||||||=|||*|||||||||||| targets:3073   ACGGACGGUCAAACGUUGGACAC   3095 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090061L24, full insert sequence	NA	coding protein	psRNATarget
XM_015761929.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   ||||||=|||*|||||||||||| targets:23   ACGGACGGUCAAACGUUGGACAC   45 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2 (LOC4350187), transcript variant X2, mRNA	disease resistance protein RGA2(LOC4350187)	coding protein	psRNATarget
XM_015787836.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   |=||||=|||*|||||||||||| targets:1247   AUGGACGGUCAAACGUUGGACAC   1269 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342071 (LOC4342071), mRNA	uncharacterized LOC4342071(LOC4342071)	coding protein	psRNATarget
XM_015787694.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   |=||||=|||*|||||||||||| targets:1493   AUGGACGGUCAAACGUUGGACAC   1515 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group acetylajmalan esterase (LOC4341925), mRNA	acetylajmalan esterase(LOC4341925)	coding protein	psRNATarget
AK071262.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   |=||||=|||*|||||||||||| targets:1375   AUGGACGGUCAAACGUUGGACAC   1397 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023085J06, full insert sequence	NA	coding protein	psRNATarget
CT827968.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   ||*|||=|||*|||||||||||| targets:463   ACAGACGGUCAAACGUUGGACAC   485 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031I05, full insert sequence	NA	coding protein	psRNATarget
XM_015759207.1	ncRNA:23   UGCCUGUCAGCUUGCAACCUGUG   1   |||*||=|||*|||||||||||| targets:54   ACGAACGGUCAAACGUUGGACAC   76 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group piriformospora indica-insensitive protein 2 (LOC4323927), mRNA	piriformospora indica-insensitive protein 2(LOC4323927)	coding protein	psRNATarget