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BaseInfo

ncRNA ID osa-miRf11381-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GAUGACCCUCAUCAGUGACGG - NA
Stem-loop(if miRNA)    C    C      AA  A           G     A   UUC   CUCAUCUUUG
AAC AAAC CCGUCA  GA UGAGGGUCAUC GUGAU GGC   ACA          U
||| |||| ||||||  || ||||||||||| ||||| |||   |||          C
UUG UUUG GGCAGU  CU ACUCCCAGUAG CACUA CCG   GUC          A
   U    U      GA  -           A     C   --G   ACAAUGCCGG
Stem-loop sequence AACCAAACCCCGUCAAAGAAUGAGGGUCAUCGGUGAUAGGCUUCACACUCAUCUUUGUCAGGCCGUAACACUGGGCCCAUCACAGAUGACCCUCAUCAGUGACGGUGUUUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164769.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  |||||||*||||||*||||||
targets:101   CCGUCACCGAUGAGAGUCAUC   121

2.5 Sequence 2433 from Patent EP2559767 NA coding protein psRNATarget
LQ236438.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  |||||||*||||||*||||||
targets:101   CCGUCACCGAUGAGAGUCAUC   121

2.5 Sequence 2433 from Patent EP2985353 NA coding protein psRNATarget
HI404308.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  |||||||*||||||*||||||
targets:101   CCGUCACCGAUGAGAGUCAUC   121

2.5 Sequence 2433 from Patent EP2074227 NA coding protein psRNATarget
AK288447.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  |||||||*||||||*||||||
targets:566   CCGUCACAGAUGAGUGUCAUC   586

2.5 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  |||||||*|||||*|||||||
targets:1707   CCGUCACGGAUGAUGGUCAUC   1727

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:21   GGCAGUGACUACUCCCAGUAG   1
  *||||||*|||||*|||||||
targets:1616   ACGUCACGGAUGAUGGUCAUC   1636

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget