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BaseInfo

ncRNA ID ath-miRf10186-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUGCGUUUGCGGGUGGUAGA - NA
Stem-loop(if miRNA)   G             C    AA  C      -----    GA   -UU GAAAACUGGCGAUUUCGAGCGGUUUAAAGCG
CC CUACCGCCCGCAA CGCA  CG UUGCGG     GAAG  GCU   U                               A
|| ||||||||||||| ||||  || ||||||     ||||  |||   |                               U
GG GAUGGUGGGCGUU GCGU  GC AACGCC     UCGC  CAA   U                               A
  A             U    -C  A      AACCA    --   CAA CGCUAAUUGUAGUUAGUAUCUUUGGCGAUCU
Stem-loop sequence CCGCUACCGCCCGCAACCGCAAACGCUUGCGGGAAGGAGCUUUUGAAAACUGGCGAUUUCGAGCGGUUUAAAGCGAUAUCUAGCGGUUUCUAUGAUUGAUGUUAAUCGCUAACAACCGCUACCAACCGCAAACGCUGCGUUUGCGGGUGGUAGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001203342.1
ncRNA:20   AGAUGGUGGGCGUUUGCGUC   1
  ||||||||||||||||||||
targets:1553   UCUACCACCCGCAAACGCAG   1572

0.0 Arabidopsis thaliana Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TPPI), partial mRNA Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(TPPI) coding protein psRNATarget
NM_125712.1
ncRNA:20   AGAUGGUGGGCGUUUGCGUC   1
  ||||**||||||||||||||
targets:702   UCUAGAACCCGCAAACGCAG   721

2.0 Arabidopsis thaliana GDSL-like Lipase/Acylhydrolase superfamily protein partial mRNA GDSL-like Lipase/Acylhydrolase superfamily protein(AT5G63170) coding protein psRNATarget