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BaseInfo

ncRNA ID	osa-miRf11377-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUGUCGAACUGCGGUAGUUC - NA
Stem-loop(if miRNA)	A      A    UG        A      -        AA CCU UCGAAC ACCG  GUUCGACA GGUACC UAUCGAAC  C ||| |||||| ||||  |||||||| |||||| ||||||||  C GGA AGCUUG UGGC  CAAGCUGU CCAUGG AUAGCUUG  A    C      A    GU        -      G        AC
Stem-loop sequence	CCUAUCGAACAACCGUGGUUCGACAAGGUACCUAUCGAACAACCACAGUUCGAUAGGGUACCUGUCGAACUGCGGUAGUUCGACAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288290.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   ||||*||||||||||||||| targets:2069   GAACAACCGCAGUUCGACAG   2088 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090019D06, full insert sequence	NA	coding protein	psRNATarget
AK288371.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   ||||*||||||||||||||| targets:353   GAACAACCGCAGUUCGACAG   372 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence	NA	coding protein	psRNATarget
AK288371.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   ||||*|||*||||||||||| targets:113   GAACAACCACAGUUCGACAG   132 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence	NA	coding protein	psRNATarget
XM_015762225.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   |||||=||*||||||||||| targets:330   GAACUGCCCCAGUUCGACAG   349 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X2, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
XM_015762225.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   |||||=||*||||||||||| targets:584   GAACUGCCCCAGUUCGACAG   603 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X2, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
XM_015762225.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   *||||=||*||||||||||| targets:615   AAACUGCCCCAGUUCGACAG   634 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X2, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
XM_015762224.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   |||||=||*||||||||||| targets:587   GAACUGCCCCAGUUCGACAG   606 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X1, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
XM_015762224.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   |||||=||*||||||||||| targets:841   GAACUGCCCCAGUUCGACAG   860 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X1, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
XM_015762224.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   *||||=||*||||||||||| targets:872   AAACUGCCCCAGUUCGACAG   891 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350222 (LOC4350222), transcript variant X1, mRNA	uncharacterized LOC4350222(LOC4350222)	coding protein	psRNATarget
AK070057.1	ncRNA:20   CUUGAUGGCGUCAAGCUGUC   1   |||||=*||||||||||||* targets:1981   GAACUGACGCAGUUCGACAU   2000 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence	NA	coding protein	psRNATarget