Search result

BaseInfo

ncRNA ID osa-miRf11374-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AUUCUGGCCCGUCACAGGUGA - NA
Stem-loop(if miRNA)                                AAC  A   AAAGC
UAUUUGAUCGCCUGUGACGGGCCAGAAUUUG   CC ACA     A
|||||||||||||||||||||||||||||||   || |||
AUAAACUAGUGGACACUGCCCGGUCUUAAAU   GG UGU     A
                               GUA  C   CUCUC
Stem-loop sequence UAUUUGAUCGCCUGUGACGGGCCAGAAUUUGAACCCAACAAAAGCAACUCUCUGUCGGAUGUAAAUUCUGGCCCGUCACAGGUGAUCAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ236207.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  ||||||||||||||||=|||*
targets:11   UCACCUGUGACGGGCCGGAAG   31

2.5 Sequence 2202 from Patent EP2985353 NA coding protein psRNATarget
HI404077.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  ||||||||||||||||=|||*
targets:11   UCACCUGUGACGGGCCGGAAG   31

2.5 Sequence 2202 from Patent EP2074227 NA coding protein psRNATarget
JB164538.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  ||||||||||||||||=|||*
targets:11   UCACCUGUGACGGGCCGGAAG   31

2.5 Sequence 2202 from Patent EP2559767 NA coding protein psRNATarget
XM_015779008.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  *|||||||||||||||*|||*
targets:1380   CCACCUGUGACGGGCCCGAAA   1400

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X3, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget
XM_015779007.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  *|||||||||||||||*|||*
targets:3250   CCACCUGUGACGGGCCCGAAA   3270

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X2, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget
XM_015779006.1
ncRNA:21   AGUGGACACUGCCCGGUCUUA   1
  *|||||||||||||||*|||*
targets:3341   CCACCUGUGACGGGCCCGAAA   3361

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X1, mRNA uncharacterized LOC107280566(LOC107280566) coding protein psRNATarget