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BaseInfo

ncRNA ID ath-miRf10184-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AAAUCGAUUUGGGGAUUUAGG - NA
Stem-loop(if miRNA)                               -        G   UU   -  GU AA
AAAUUUAAACCCUAAAUCCCCAAAUCGAUU UAUUAUCU CGA  UUG AG  C  G
|||||||||||||||||||||||||||||| |||||||| |||  ||| ||  |
UUUAAAUUUGGGAUUUAGGGGUUUAGCUAA GUAAUAGA GUU  AGU UC  G  G
                              A        -   UU   G  UG GU
Stem-loop sequence AAAUUUAAACCCUAAAUCCCCAAAUCGAUUUAUUAUCUGCGAUUUUGAGGUCAAGGUGGGUCUGUGAUUUUGAGAUAAUGAAAUCGAUUUGGGGAUUUAGGGUUUAAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_122292.4
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:284   CUUAAAUCCCCAAAUCAAUUA   304

2.5 Arabidopsis thaliana Pectinacetylesterase family protein mRNA Pectinacetylesterase family protein(AT5G23870) coding protein psRNATarget
NM_001343830.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:284   CUUAAAUCCCCAAAUCAAUUA   304

2.5 Arabidopsis thaliana Pectinacetylesterase family protein mRNA Pectinacetylesterase family protein(AT5G23870) coding protein psRNATarget
NM_203097.2
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:284   CUUAAAUCCCCAAAUCAAUUA   304

2.5 Arabidopsis thaliana Pectinacetylesterase family protein mRNA Pectinacetylesterase family protein(AT5G23870) coding protein psRNATarget
NM_203098.2
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:154   CUUAAAUCCCCAAAUCAAUUA   174

2.5 Arabidopsis thaliana Pectinacetylesterase family protein mRNA Pectinacetylesterase family protein(AT5G23870) coding protein psRNATarget
AK316872.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:203   CUUAAAUCCCCAAAUCAAUUA   223

2.5 Arabidopsis thaliana AT5G23870 mRNA, complete cds, clone: RAFL11-10-I16 NA coding protein psRNATarget
AY062706.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  |=||||||||||||||*|||*
targets:64   CUUAAAUCCCCAAAUCAAUUA   84

2.5 Arabidopsis thaliana pectinacetylesterase (At5g23870; MRO11.9) mRNA, complete cds NA coding protein psRNATarget
NM_122494.4
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  ***|||||||||||||*||||
targets:1038   GAGAAAUCCCCAAAUCAAUUU   1058

2.5 Arabidopsis thaliana kinase family with leucine-rich repeat domain-containing protein mRNA kinase family with leucine-rich repeat domain-containing protein(AT5G25930) coding protein psRNATarget
BT004058.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  ***|||||||||||||*||||
targets:904   GAGAAAUCCCCAAAUCAAUUU   924

2.5 Arabidopsis thaliana clone RAFL15-09-P09 (R20481) putative receptor protein kinase (At5g25930) mRNA, complete cds NA coding protein psRNATarget
BX831513.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  ***|||||||||||||*||||
targets:881   GAGAAAUCCCCAAAUCAAUUU   901

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZG05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
FJ708783.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  ***|||||||||||||*||||
targets:818   GAGAAAUCCCCAAAUCAAUUU   838

2.5 Arabidopsis thaliana leucine-rich repeat receptor-like protein kinase (LRR-RLK) mRNA, partial cds NA coding protein psRNATarget
AK316946.1
ncRNA:21   GGAUUUAGGGGUUUAGCUAAA   1
  ***|||||||||||||*||||
targets:893   GAGAAAUCCCCAAAUCAAUUU   913

2.5 Arabidopsis thaliana AT5G25930 mRNA, partial cds, clone: RAFL16-43-K22 NA coding protein psRNATarget