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BaseInfo

ncRNA ID	osa-miRf11339-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCCCGAUUGGUAACACCAACC - NA
Stem-loop(if miRNA)	U        A     A     A             -------   -   AUCAUUUUUAGUCCCGGUUCAU  GAUUUUUA UCCCG UUGGU ACACCAACCAGGA       CUA AAA                      U  |||||||| ||||| ||||| |||||||||||||       ||| |||                      C  CUAGAAAU AGGGC AACCA UGUGGUUGGUCCU       AGG GCC                      C A        C     C     C             AAUUUCU   A   GGGGGACUGUAGGAUGACUGUC
Stem-loop sequence	UGAUUUUUAAUCCCGAUUGGUAACACCAACCAGGACUAAAAAUCAUUUUUAGUCCCGGUUCAUUCCCUGUCAGUAGGAUGUCAGGGGGCCGAGGAUCUUUAAUCCUGGUUGGUGUCACCAACCGGGACUAAAGAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   |||||||||||||||*||||| targets:160   GGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   |||||||*|||||||*||||| targets:117   GGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK065349.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   *|||||||*|||||||||||| targets:2195   AGUUGGUGCUACCAAUCGGGA   2215 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   *||||||||||||||*||||| targets:2401   CGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   ||||*||||||||||*||||| targets:919   GGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:21   CCAACCACAAUGGUUAGCCCU   1   ||||*||||||||||*||||| targets:2394   GGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget