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BaseInfo

ncRNA ID osa-miRf11325-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUCCAACCGGGACUAAAGUU - NA
Stem-loop(if miRNA)      A  U               UU          AG        A
GAGGA GA CUUUAGUCCCGGUUG  GUUACCAACC  GACUAAAA U
||||| || |||||||||||||||  ||||||||||  |||||||| C
UUUUU CU GAAAUCAGGGCCAAC  CAAUGGUUGG  CUGAUUUU A
     A  U               CU          CU        U
Stem-loop sequence GAGGAAGAUCUUUAGUCCCGGUUGUUGUUACCAACCAGGACUAAAAAUCAUUUUUAGUCUCGGUUGGUAACUCCAACCGGGACUAAAGUUCAUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288598.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*||||||||||||||||*|
targets:971   AUCUUUAGUCCCGGUUGGUG   990

2.5 Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence NA coding protein psRNATarget
XM_015790121.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*|||||||||||||||||*
targets:974   AUCUUUAGUCCCGGUUGGAC   993

2.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA4 (LOC107281518), transcript variant X2, mRNA putative disease resistance protein RGA4(LOC107281518) coding protein psRNATarget
AK288377.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*||||||||||||||||*|
targets:1377   AUCUUUAGUCCCGGUUGGUG   1396

2.5 Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*||||||||||||||||*|
targets:148   AUCUUUAGUCCCGGUUGGUG   167

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK288463.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*||||||||||||||||*|
targets:556   AUCUUUAGUCCCGGUUGGUG   575

2.5 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:20   UUGAAAUCAGGGCCAACCUC   1
  |*||||||||||||||||*|
targets:1831   AUCUUUAGUCCCGGUUGGUG   1850

2.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget