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BaseInfo

ncRNA ID	ath-miRf10180-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GCCGCCAUAUCUCUCCGCCGUC - NA
Stem-loop(if miRNA)	U  CU           U  C   A      AGAAUGA    AUACAGAGUGUUGGUGUUUCGCCGCGUCGGAUUGACCUGAAAU GA GG  UUUGACGGUGG GA AUA UGGUGG       UUUG                                           U || ||  ||||||||||| || ||| ||||||       ||||                                           C CU UC  AAACUGCCGCC CU UAU ACCGCC       CAAC                                           G   C  UC           U  C   -      ------G    UACCUCAGUCAGCAGCCGGCUCGAGAUUUUAAGAGUAGCUGCC
Stem-loop sequence	GAUGGCUUUUGACGGUGGUGACAUAAUGGUGGAGAAUGAUUUGAUACAGAGUGUUGGUGUUUCGCCGCGUCGGAUUGACCUGAAAUUCGCCGUCGAUGAGAAUUUUAGAGCUCGGCCGACGACUGACUCCAUCAACGCCGCCAUAUCUCUCCGCCGUCAAACUCUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_114446.4	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:163   GACGGCGGAGAGAUAUGGCGGC   184 Target Full Sequence	0.0	Arabidopsis thaliana Polyketide synthase, enoylreductase family protein mRNA	Polyketide synthase, enoylreductase family protein(AT3G45770)	coding protein	psRNATarget
AY086398.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:36   GACGGCGGAGAGAUAUGGCGGC   57 Target Full Sequence	0.0	Arabidopsis thaliana clone 249370 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_202659.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:8   GACGGCGGAGAGAUAUGGCGGC   29 Target Full Sequence	0.0	Arabidopsis thaliana Polyketide synthase, enoylreductase family protein mRNA	Polyketide synthase, enoylreductase family protein(AT3G45770)	coding protein	psRNATarget
BX823320.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:30   GACGGCGGAGAGAUAUGGCGGC   51 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX823798.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:8   GACGGCGGAGAGAUAUGGCGGC   29 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX822124.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:28   GACGGCGGAGAGAUAUGGCGGC   49 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX823364.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:15   GACGGCGGAGAGAUAUGGCGGC   36 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX824280.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:10   GACGGCGGAGAGAUAUGGCGGC   31 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX824086.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:5   GACGGCGGAGAGAUAUGGCGGC   26 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY062554.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||||||||||||||||||| targets:36   GACGGCGGAGAGAUAUGGCGGC   57 Target Full Sequence	0.0	Arabidopsis thaliana oxidoreductase of zinc-binding dehydrogenase family (At3g45770) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001336445.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||*||||*||||||||||| targets:718   GACGGAGGAGCGAUAUGGCGGC   739 Target Full Sequence	2.5	Arabidopsis thaliana SU(VAR)3-9 homolog 2 (SUVH2), mRNA	SU(VAR)3-9 homolog 2(SUVH2)	coding protein	psRNATarget
NM_001336444.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||*||||*||||||||||| targets:718   GACGGAGGAGCGAUAUGGCGGC   739 Target Full Sequence	2.5	Arabidopsis thaliana SU(VAR)3-9 homolog 2 (SUVH2), mRNA	SU(VAR)3-9 homolog 2(SUVH2)	coding protein	psRNATarget
NM_001336446.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||*||||*||||||||||| targets:656   GACGGAGGAGCGAUAUGGCGGC   677 Target Full Sequence	2.5	Arabidopsis thaliana SU(VAR)3-9 homolog 2 (SUVH2), mRNA	SU(VAR)3-9 homolog 2(SUVH2)	coding protein	psRNATarget
NM_128889.3	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||*||||*||||||||||| targets:656   GACGGAGGAGCGAUAUGGCGGC   677 Target Full Sequence	2.5	Arabidopsis thaliana SU(VAR)3-9 homolog 2 (SUVH2), mRNA	SU(VAR)3-9 homolog 2(SUVH2)	coding protein	psRNATarget
AF344445.1	ncRNA:22   CUGCCGCCUCUCUAUACCGCCG   1   |||||*||||*||||||||||| targets:656   GACGGAGGAGCGAUAUGGCGGC   677 Target Full Sequence	2.5	Arabidopsis thaliana SUVH2 (SUVH2) mRNA, complete cds	NA	coding protein	psRNATarget