Search result

BaseInfo

ncRNA ID	osa-miRf11312-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGGUUGGUGUUACCAAUCAG - NA
Stem-loop(if miRNA)	UUAU   C                                   UAC GGUUGGUAACACCAACCGAGACUAAUGCUAC     ||| ||||||||||||||||||||||||||||||U     AUG CUAACCAUUGUGGUUGGCUCUGAUUACGAUA AAUC   A
Stem-loop sequence	UUAUUACCGGUUGGUAACACCAACCGAGACUAAUGCUACUAUAGCAUUAGUCUCGGUUGGUGUUACCAAUCAGUACUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK119354.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |||=|||||||||||||||| targets:76   CUGGUUGGUAACACCAACCG   95 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |||=|||||||||||||||| targets:685   CUGGUUGGUAACACCAACCG   704 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget
AK121178.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |||=|||||||||||||||* targets:1946   CUGGUUGGUAACACCAACCC   1965 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |||=|||||||||||||||* targets:5007   CUGGUUGGUAACACCAACCA   5026 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   =||=|||||||=|||||||| targets:364   UUGGUUGGUAAUACCAACCG   383 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:669   CCGGUUGGUAACACCAACCG   688 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:249   CCGGUUGGUAACACCAACCG   268 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:2071   CCGGUUGGUAACACCAACCG   2090 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:1854   CCGGUUGGUAACACCAACCG   1873 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:1322   CCGGUUGGUAACACCAACCG   1341 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||| targets:58   CCGGUUGGUAACACCAACCG   77 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:20   GACUAACCAUUGUGGUUGGC   1   |*|=|||||||||||||||* targets:1711   CCGGUUGGUAACACCAACCA   1730 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget