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BaseInfo

ncRNA ID ath-miRf10179-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AGUGGUGGGAUCGAUCGAUCC - NA
Stem-loop(if miRNA)    UG                  -A   GGCGGACAUUUUACUUC      U  G    GGAUAGAUCGAUCUCCACCUAGGAUCGAUUGAUCCC
GAG  UUGGAUCGAUCGAUCCCG  GCU                 GGUGGA GA UGGU                                    G
|||  ||||||||||||||||||  |||                 |||||| || ||||
UUU  AACCUAGCUAGCUAGGGU  UGA                 UCUAGC UA GCUA                                    A
   GU                  GG   -----------------      -  -    GGUUUUGAGUAGCAGCUUCUGUUUAGUAGGCGGUCG
Stem-loop sequence GAGUGUUGGAUCGAUCGAUCCCGAGCUGGCGGACAUUUUACUUCGGUGGAUGAGUGGUGGAUAGAUCGAUCUCCACCUAGGAUCGAUUGAUCCCGAGCUGGCGGAUGAUUUGUCUUCGACGAUGAGUUUUGGAUCGAUCGAUCUAGUGGUGGGAUCGAUCGAUCCAAUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113998.2
ncRNA:21   CCUAGCUAGCUAGGGUGGUGA   1
  ||||||||||||||||=||||
targets:244   GGAUCGAUCGAUCCCAUCACU   264

1.5 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G31350) coding protein psRNATarget
NM_001339159.1
ncRNA:21   CCUAGCUAGCUAGGGUGGUGA   1
  |||||||||||||||||||*|
targets:175   GGAUCGAUCGAUCCCACCAGU   195

1.5 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT3G44580) coding protein psRNATarget