ncRNA ID | ath-miRf10179-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - AGUGGUGGGAUCGAUCGAUCC - NA |
Stem-loop(if miRNA) |
   UG                  -A   GGCGGACAUUUUACUUC      U  G    GGAUAGAUCGAUCUCCACCUAGGAUCGAUUGAUCCC GAG  UUGGAUCGAUCGAUCCCG  GCU                 GGUGGA GA UGGU                                    G |||  ||||||||||||||||||  |||                 |||||| || |||| UUU  AACCUAGCUAGCUAGGGU  UGA                 UCUAGC UA GCUA                                    A    GU                  GG   -----------------      -  -    GGUUUUGAGUAGCAGCUUCUGUUUAGUAGGCGGUCG |
Stem-loop sequence | GAGUGUUGGAUCGAUCGAUCCCGAGCUGGCGGACAUUUUACUUCGGUGGAUGAGUGGUGGAUAGAUCGAUCUCCACCUAGGAUCGAUUGAUCCCGAGCUGGCGGAUGAUUUGUCUUCGACGAUGAGUUUUGGAUCGAUCGAUCUAGUGGUGGGAUCGAUCGAUCCAAUGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_113998.2 |
|
1.5 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT3G31350) | coding protein | psRNATarget | |||||||||
NM_001339159.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein mRNA | hypothetical protein(AT3G44580) | coding protein | psRNATarget |