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BaseInfo

ncRNA ID osa-miRf11300-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CAGGGAGCUCUUGAUGUUUGUGA - NA
Stem-loop(if miRNA) U  UUU              U               G    ----CA     AA  AG AGUAUAUAUGAAAGCUUAAC
 UC   GAAGCAGGGAGCUC UGAUGUUUGUGAGGG UAUA      UAGAG  UG  A                    U
 ||   |||||||||||||| ||||||||||||||| ||||      |||||  ||  |
 AG   UUUCGUCUCUCGAG ACUACAAACACUCCC AUAU      UUUUA  UA  C                    A
A  UAC              U               G    CUUUUU     --  -- CAAUGUAUAGAGGAUCUUGG
Stem-loop sequence UUCUUUGAAGCAGGGAGCUCUUGAUGUUUGUGAGGGGUAUACAUAGAGAAUGAGAAGUAUAUAUGAAAGCUUAACUAGGUUCUAGGAGAUAUGUAACCAUAUUUUUUUUUCUAUAGCCCUCACAAACAUCAUGAGCUCUCUGCUUUCAUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK058957.1
ncRNA:23   AGUGUUUGUAGUUCUCGAGGGAC   1
  *||||||||||||||||*|||||
targets:140   GCACAAACAUCAAGAGCGCCCUG   162

1.5 Oryza sativa Japonica Group cDNA clone:001-020-B05, full insert sequence NA coding protein psRNATarget