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BaseInfo

ncRNA ID	osa-miRf11297-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCCGGUUGGUAACACGAACCGGGA - NA
Stem-loop(if miRNA)	C    G        G  AAC  A                GGUU  GC     A CGAU UUUA UCCUGGUU GU   AC AACCGGGACUAAAGAU    UG  CGGCC C |||| |||| |||||||| ||   || ||||||||||||||||    ||  ||||| GCUA AAAU AGGGCCAA CA   UG UUGGCCCUGAUUUCUA    AC  GUCGG G     U    A        G  CAA  G                ----  UA     U
Stem-loop sequence	CGAUCUUUAGUCCUGGUUGGUAACACAAACCGGGACUAAAGAUGGUUUGGCCGGCCACGUGGCUGAUCAAUCUUUAGUCCCGGUUGGUAACACGAACCGGGAAUAAAUAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015758314.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||=|||||||||||||||| targets:915   UCCCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK289098.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||*|||||||||||||||| targets:156   UCCCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||*||*||||||||||||| targets:113   UCCCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||*|||||||||||||||| targets:2390   UCCCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||*||||||||||||*||| targets:1385   UCCCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||||||*||||||||||||||*| targets:1839   UCCCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   ||||*|||*|||||||||||||||| targets:2397   UCCCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   *|||||||*|||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
HI404518.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   *|||||||*|||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   *|||||||*|||*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
AK288624.1	ncRNA:25   AGGGCCAAGCACAAUGGUUGGCCCU   1   |*||||||*||||||||||||*||| targets:4962   UACCGGUUAGUGUUACCAACCAGGA   4986 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget