Search result

BaseInfo

ncRNA ID osa-miRf11294-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUUGGUACUACCAACCGGGA - NA
Stem-loop(if miRNA)             U   A  U            C        U
AUUUUAGUUCCG UUG UA UACCAACCGGGA UAAAGAUC A
|||||||||||| ||| || |||||||||||| |||||||| A
UGAAAUCAGGGC AAC AU AUGGUUGGCCCU AUUUCUAG A
            C   C  C            C        U
Stem-loop sequence AUUUUAGUUCCGUUUGAUAUUACCAACCGGGACUAAAGAUCUAAAUGAUCUUUACUCCCGGUUGGUACUACCAACCGGGACUAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK099726.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  |*|||||||||||||||||||
targets:1101   UACCGGUUGGUAGUACCAACC   1121

0.0 Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence NA coding protein psRNATarget
AK121178.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  ||||||||||||*||||||||
targets:1917   UCCCGGUUGGUAUUACCAACC   1937

1.5 Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  ||=|||||||||*||||||||
targets:404   UCUCGGUUGGUAUUACCAACC   424

2.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget
HI404518.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  |=||||||||||*|||||||=
targets:4   UUCCGGUUGGUAAUACCAACU   24

2.5 Sequence 2643 from Patent EP2074227 NA coding protein psRNATarget
JB164979.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  |=||||||||||*|||||||=
targets:4   UUCCGGUUGGUAAUACCAACU   24

2.5 Sequence 2643 from Patent EP2559767 NA coding protein psRNATarget
LQ236648.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  |=||||||||||*|||||||=
targets:4   UUCCGGUUGGUAAUACCAACU   24

2.5 Sequence 2643 from Patent EP2985353 NA coding protein psRNATarget
AK288424.1
ncRNA:21   AGGGCCAACCAUCAUGGUUGG   1
  *|||||||||||*||||||||
targets:1378   CCCCGGUUGGUAAUACCAACC   1398

1.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget