ncRNA ID | ath-miRf10177-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - GGCACUCGACCACGGGGUCGAGUG - NA |
Stem-loop(if miRNA) |
AGG            A         AA  G   -GA  G   G    CACUCGACCUCG GGUCGAGUG  GU AUC   GU ACC U    |||||||||||| |||||||||  || |||   || |||    GUGAGCUGGGGC CCAGCUCAC  UA UAG   UA UGG C UUG            A         GG  G   AGG  G   U |
Stem-loop sequence | AGGCACUCGACCUCGAGGUCGAGUGAAGUGAUCGAGUGACCGUCUGGUGAUGGAGAUGAUGGCACUCGACCACGGGGUCGAGUGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |