Search result

BaseInfo

ncRNA ID osa-miRf11285-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CAUGUCCUCGUCCUAGGUGAAAC - NA
Stem-loop(if miRNA)          G       U                A     AUUUCGU  A
GUGGUUGUU CAUCUAG AUGAGGACGUGGCAUC UAUUA       GC A
||||||||| ||||||| |||||||||||||||| |||||       ||
CACCAACAA GUGGAUC UGCUCCUGUACCGUAG AUAAU       CG U
         A       C                G     ----GAU  G
Stem-loop sequence GUGGUUGUUGCAUCUAGUAUGAGGACGUGGCAUCAUAUUAAUUUCGUGCAAUGGCUAGUAAUAGGAUGCCAUGUCCUCGUCCUAGGUGAAACAACCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015768630.1
ncRNA:23   CAAAGUGGAUCCUGCUCCUGUAC   1
  |||||||||||||||||||||||
targets:298   GUUUCACCUAGGACGAGGACAUG   320

0.0 PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA transmembrane protein 56-B(LOC4327490) coding protein psRNATarget
XM_015769559.1
ncRNA:23   CAAAGUGGAUCCUGCUCCUGUAC   1
  ***||||||=||||||||||*||
targets:529   CCGUCACCUGGGACGAGGACCUG   551

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280099 (LOC107280099), mRNA uncharacterized LOC107280099(LOC107280099) coding protein psRNATarget