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BaseInfo

ncRNA ID osa-miRf11283-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUGGUGUUGACUCGGUCUUC - NA
Stem-loop(if miRNA)       UUUA UG                               CA    --------------     U
CGUCUA    G  GUGUUGACUCGGUCUUCGUUCCAUGUGGAGU  ACGU              GAUGC U
||||||    |  |||||||||||||||||||||||||||||||  ||||              ||||| A
GCGGAU    C  CACAACUGAGCUAGAAGUAAGGUGUACCUCA  UGCG              UUACG G
      -CAC GU                               AC    UCAAAAAAUUAAGA     U
Stem-loop sequence CGUCUAUUUAGUGGUGUUGACUCGGUCUUCGUUCCAUGUGGAGUCAACGUGAUGCUUAGUGCAUUAGAAUUAAAAAACUGCGUCAACUCCAUGUGGAAUGAAGAUCGAGUCAACACUGCCACUAGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015763895.1
ncRNA:20   CUUCUGGCUCAGUUGUGGUG   1
  ||||||||||||||||||==
targets:688   GAAGACCGAGUCAACACCGU   707

2.5 PREDICTED: Oryza sativa Japonica Group methyltransferase-like protein 1 (LOC4324378), transcript variant X2, mRNA methyltransferase-like protein 1(LOC4324378) coding protein psRNATarget
AK065023.1
ncRNA:20   CUUCUGGCUCAGUUGUGGUG   1
  ||||||||||||||||||==
targets:689   GAAGACCGAGUCAACACCGU   708

2.5 Oryza sativa Japonica Group cDNA clone:J013001G08, full insert sequence NA coding protein psRNATarget
XM_015763885.1
ncRNA:20   CUUCUGGCUCAGUUGUGGUG   1
  ||||||||||||||||||==
targets:691   GAAGACCGAGUCAACACCGU   710

2.5 PREDICTED: Oryza sativa Japonica Group methyltransferase-like protein 1 (LOC4324378), transcript variant X1, mRNA methyltransferase-like protein 1(LOC4324378) coding protein psRNATarget