ncRNA ID | osa-miRf11283-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUGGUGUUGACUCGGUCUUC - NA |
Stem-loop(if miRNA) |
      UUUA UG                               CA    --------------     U CGUCUA    G  GUGUUGACUCGGUCUUCGUUCCAUGUGGAGU  ACGU              GAUGC U ||||||    |  |||||||||||||||||||||||||||||||  ||||              ||||| A GCGGAU    C  CACAACUGAGCUAGAAGUAAGGUGUACCUCA  UGCG              UUACG G       -CAC GU                               AC    UCAAAAAAUUAAGA     U |
Stem-loop sequence | CGUCUAUUUAGUGGUGUUGACUCGGUCUUCGUUCCAUGUGGAGUCAACGUGAUGCUUAGUGCAUUAGAAUUAAAAAACUGCGUCAACUCCAUGUGGAAUGAAGAUCGAGUCAACACUGCCACUAGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015763895.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group methyltransferase-like protein 1 (LOC4324378), transcript variant X2, mRNA | methyltransferase-like protein 1(LOC4324378) | coding protein | psRNATarget | |||||||||
AK065023.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013001G08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015763885.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group methyltransferase-like protein 1 (LOC4324378), transcript variant X1, mRNA | methyltransferase-like protein 1(LOC4324378) | coding protein | psRNATarget |