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BaseInfo

ncRNA ID osa-miRf11251-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCGUCACUGAUGACUCAUCU - NA
Stem-loop(if miRNA)    A   C U                 U U  UAA
CCC UCA A AUGAGUUAUCAGUGACG G CG   C
||| ||| | ||||||||||||||||| | ||
GGG AGU U UACUCAGUAGUCACUGC C GU   U
   C   C C                 - U  CCA
Stem-loop sequence CCCAUCACAUAUGAGUUAUCAGUGACGUGUCGUAACUACCUGUCCGUCACUGAUGACUCAUCUCUGACGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015763577.1
ncRNA:20   UCUACUCAGUAGUCACUGCC   1
  |||||||||||||||||||*
targets:1465   AGAUGAGUCAUCAGUGACGU   1484

1.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget
AK119390.1
ncRNA:20   UCUACUCAGUAGUCACUGCC   1
  ||||||*|||||||||||||
targets:3075   AGAUGACUCAUCAGUGACGG   3094

1.0 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK068923.1
ncRNA:20   UCUACUCAGUAGUCACUGCC   1
  ||||||*|||||||||||||
targets:1231   AGAUGACUCAUCAGUGACGG   1250

1.0 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
XM_015761270.1
ncRNA:20   UCUACUCAGUAGUCACUGCC   1
  *|||||*|||||*|||||||
targets:14   UGAUGACUCAUCUGUGACGG   33

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA uncharacterized LOC9270068(LOC9270068) coding protein psRNATarget
AK121156.1
ncRNA:20   UCUACUCAGUAGUCACUGCC   1
  |||||*||||||*|||||||
targets:1081   AGAUGUGUCAUCCGUGACGG   1100

2.5 Oryza sativa Japonica Group cDNA clone:J023079A20, full insert sequence NA coding protein psRNATarget