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BaseInfo

ncRNA ID osa-miRf11240-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GAUGGUGUACUUGGGCAGCGA - NA
Stem-loop(if miRNA)    UGA          ----         C   -A  UU     ------U  -A G
GGU   UGGUGUACUU    GGGCAGCGA UGG  GC  GCAGU       GC  C U
|||   ||||||||||    ||||||||| |||  ||  |||||       ||  |
CCG   GCCACAUGAA    CCCGUCGUU GCC  CG  CGUCA       CG  G G
   -UG          GCUG         A   GG  -U     CAUAAGC  GG A
Stem-loop sequence GGUUGAUGGUGUACUUGGGCAGCGACUGGAGCUUGCAGUUGCACGUGAGGGGCCGAAUACACUGCUGCGGCCGAUUGCUGCCCGUCGAAGUACACCGGUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289017.1
ncRNA:21   AGCGACGGGUUCAUGUGGUAG   1
  ||||||*|||||||||||*||
targets:790   UCGCUGGCCAAGUACACCCUC   810

2.5 Oryza sativa Japonica Group cDNA, clone: J090089O05, full insert sequence NA coding protein psRNATarget
AK107576.1
ncRNA:21   AGCGACGGGUUCAUGUGGUAG   1
  *||||*|=||||||||||||*
targets:882   CCGCUCCUCAAGUACACCAUG   902

3.0 Oryza sativa Japonica Group cDNA clone:002-130-D09, full insert sequence NA coding protein psRNATarget
AK072031.1
ncRNA:21   AGCGACGGGUUCAUGUGGUAG   1
  *||||*|=||||||||||||*
targets:999   CCGCUCCUCAAGUACACCAUG   1019

3.0 Oryza sativa Japonica Group cDNA clone:J013104E22, full insert sequence NA coding protein psRNATarget
XM_015789807.1
ncRNA:21   AGCGACGGGUUCAUGUGGUAG   1
  *||||*|=||||||||||||*
targets:993   CCGCUCCUCAAGUACACCAUG   1013

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343926 (LOC4343926), mRNA uncharacterized LOC4343926(LOC4343926) coding protein psRNATarget