ncRNA ID | osa-miRf11240-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GAUGGUGUACUUGGGCAGCGA - NA |
Stem-loop(if miRNA) |
   UGA          ----         C   -A  UU     ------U  -A G GGU   UGGUGUACUU    GGGCAGCGA UGG  GC  GCAGU       GC  C U |||   ||||||||||    ||||||||| |||  ||  |||||       ||  | CCG   GCCACAUGAA    CCCGUCGUU GCC  CG  CGUCA       CG  G G    -UG          GCUG         A   GG  -U     CAUAAGC  GG A |
Stem-loop sequence | GGUUGAUGGUGUACUUGGGCAGCGACUGGAGCUUGCAGUUGCACGUGAGGGGCCGAAUACACUGCUGCGGCCGAUUGCUGCCCGUCGAAGUACACCGGUGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289017.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090089O05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107576.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-130-D09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK072031.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013104E22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015789807.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343926 (LOC4343926), mRNA | uncharacterized LOC4343926(LOC4343926) | coding protein | psRNATarget |