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BaseInfo

ncRNA ID	osa-miRf11230-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CCGGUUGGUAACACGAACCGG - NA
Stem-loop(if miRNA)	UUUU         G  AAC  A                -  U UG    GC     GUCCCGGUU GU   AC AACCGGGACUAAAGAU GG U  GCCG  C     ||||||||| ||   || |||||||||||||||| || |  ||||     CAGGGCCAA CA   UG UUGGCCCUGAUUUCUA CC A  CGGU  A AAAU         G  CAA  G                G  - GU    GC
Stem-loop sequence	UUUUGUCCCGGUUGGUAACACAAACCGGGACUAAAGAUGGUUUGGCCGGCCACGUGGCUGACCGAUCUUUAGUCCCGGUUGGUAACACGAACCGGGACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015758314.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||=|||||||||||||| targets:917   CCGGUUUGUGUUACCAACCGG   937 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK065811.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||=||||||=||||||| targets:1176   CCGGUUUGUGUUAUCAACCGG   1196 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||||||||||||| targets:158   CCGGUUGGUGUUACCAACCGG   178 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*||*||||||||||| targets:115   CCGGUUGGUUUUACCAACCGG   135 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||||||||||||| targets:2392   CCGGUUAGUGUUACCAACCGG   2412 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||||||||||||| targets:1841   CCGGUUGGUGUUACCAACCGG   1861 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015755226.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||||||**||||||||||||| targets:81   CCGGUUGAUGUUACCAACCGG   101 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK288405.1	ncRNA:21   GGCCAAGCACAAUGGUUGGCC   1   ||*|||*|||||||||||||| targets:2399   CCCGUUGGUGUUACCAACCGG   2419 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget