ncRNA ID | ath-miRf10171-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - GCGGUACUCGACCAGGGGGUCGAGU - NA |
Stem-loop(if miRNA) |
AUGAA G         A G          G   GAU    UGAA   G       G A   GAUGA         A      G UACUCGACC U UGGUUGAGUA UGU   CGAG    GGU AUUUGGU G CGU     UACUCGACC G      | ||||||||| | |||||||||| |||   ||||    ||| ||||||| | |||     |||||||||      U GUGAGCUGG G ACCAGCUCAU GCG   GUUC    UUA UAAACUA U GUA     GUGAGCUGG G UGUUG G         G G          G   ---    --UG   G       G -   -----         A |
Stem-loop sequence | AUGAAGGUACUCGACCAUGUGGUUGAGUAGUGUGAUCGAGUGAAGGUGAUUUGGUGGACGUGAUGAUACUCGACCAGGAGGUCGAGUGAUGUGAUCAAAUGAUUGUCUUGGCGGUACUCGACCAGGGGGUCGAGUGGUGUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT025674.1 |
|
2.5 | Arabidopsis thaliana | NA | coding protein | psRNATarget | |||||||||
AY231407.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds | NA | coding protein | psRNATarget |