Search result

BaseInfo

ncRNA ID	osa-miRf11223-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGUCCGCCUGCGAAGAUAAU - NA
Stem-loop(if miRNA)	GG               G     -G         AAGCCAACGACUAU        CGAAAA  GUCUUCGCAGGCGGG CGGCC  UCCGCCUGU              GAAGAUCG ||||||  ||||||||||||||| |||||  |||||||||              |||||||C GCUUUU  UAGAAGCGUCCGCCU GCCGG  GGGCGGACG              CUUCUAGC       AA               -     AG         --------------
Stem-loop sequence	CGAAAAGGGUCUUCGCAGGCGGGGCGGCCGUCCGCCUGUAAGCCAACGACUAUGAAGAUCGCCGAUCUUCGCAGGCGGGGAGGCCGUCCGCCUGCGAAGAUAAUUUUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK120802.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   *||||=|||||||||||||* targets:398   CUUAUUUUCGCAGGCGGACA   417 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence	NA	coding protein	psRNATarget
AK120802.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ||*||=|||||||||||||* targets:525   AUGAUUUUCGCAGGCGGACC   544 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence	NA	coding protein	psRNATarget
AK120802.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   =*|||=|||||||||||||* targets:1334   GCUAUUUUCGCAGGCGGACC   1353 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023013A15, full insert sequence	NA	coding protein	psRNATarget
AK288478.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   *||||=|||||||||||||* targets:2257   CUUAUUUUCGCAGGCGGACA   2276 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090038D21, full insert sequence	NA	coding protein	psRNATarget
AK288478.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   =*|||=|||||||||||||* targets:3453   GCUAUUUUCGCAGGCGGACC   3472 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090038D21, full insert sequence	NA	coding protein	psRNATarget
AK289132.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   =|*||=|||||||||||||| targets:2282   GUAAUUUUCGCAGGCGGACG   2301 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090098P21, full insert sequence	NA	coding protein	psRNATarget
HI404285.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:45   UCAAUCUUCGCAGGCGGACC   64 Target Full Sequence	3.0	Sequence 2410 from Patent EP2074227	NA	coding protein	psRNATarget
JB164746.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:45   UCAAUCUUCGCAGGCGGACC   64 Target Full Sequence	3.0	Sequence 2410 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236415.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:45   UCAAUCUUCGCAGGCGGACC   64 Target Full Sequence	3.0	Sequence 2410 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015786773.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   **|||=|||||||||||||* targets:918   CCUAUUUUCGCAGGCGGACA   937 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group anthranilate O-methyltransferase 2-like (LOC107278528), mRNA	anthranilate O-methyltransferase 2-like(LOC107278528)	coding protein	psRNATarget
JB164409.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:4   UCCAUCUUCGCAGGCGGACC   23 Target Full Sequence	3.0	Sequence 2073 from Patent EP2559767	NA	coding protein	psRNATarget
HI403948.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:4   UCCAUCUUCGCAGGCGGACC   23 Target Full Sequence	3.0	Sequence 2073 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236078.1	ncRNA:20   UAAUAGAAGCGUCCGCCUGC   1   ***||||||||||||||||* targets:4   UCCAUCUUCGCAGGCGGACC   23 Target Full Sequence	3.0	Sequence 2073 from Patent EP2985353	NA	coding protein	psRNATarget