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BaseInfo

ncRNA ID	osa-miRf11221-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GUUGCAGCAGCAGGGACAGU - NA
Stem-loop(if miRNA)	---A      G  U      G    GA   ---  C GCUUG    GCUGUU CU CUGCUG GGCU  CAC   CA U |||||    |||||| || |||||| ||||  |||   || CGAGC    UGACAG GA GACGAC UUGG  GUG   GU G      AUCG      G  C      G    UC   UUC  G
Stem-loop sequence	GCUUGAGCUGUUGCUUCUGCUGGGGCUGACACCACUGGUGCUUGUGCUGGUUGCAGCAGCAGGGACAGUGCUACGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015790403.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   |||||||||||||||||||| targets:421   ACUGUCCCUGCUGCUGCAAC   440 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor RAP2-11-like (LOC107275458), mRNA	ethylene-responsive transcription factor RAP2-11-like(LOC107275458)	coding protein	psRNATarget
AK112098.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   ||||*|||||||||*||||| targets:61   ACUGCCCCUGCUGCGGCAAC   80 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-108-E05, full insert sequence	NA	coding protein	psRNATarget
AK111614.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   ||||*|||||||||*||||| targets:363   ACUGCCCCUGCUGCGGCAAC   382 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013104O14, full insert sequence	NA	coding protein	psRNATarget
AB040053.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   ||||*|||||||||*||||| targets:354   ACUGCCCCUGCUGCGGCAAC   373 Target Full Sequence	2.5	Oryza sativa Japonica Group rCOP1 mRNA for COP1, complete cds	NA	coding protein	psRNATarget
AK102740.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   ||||*|||||||||*||||| targets:545   ACUGCCCCUGCUGCGGCAAC   564 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033106E23, full insert sequence	NA	coding protein	psRNATarget
XM_015772116.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   ||||*|||||||||*||||| targets:537   ACUGCCCCUGCUGCGGCAAC   556 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase COP1 (LOC4330868), mRNA	E3 ubiquitin-protein ligase COP1(LOC4330868)	coding protein	psRNATarget
AK287653.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   =|||*||||||*|||||||| targets:494   GCUGCCCCUGCGGCUGCAAC   513 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065096F16, full insert sequence	NA	coding protein	psRNATarget
XM_015768606.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   =|||*||||||*|||||||| targets:505   GCUGCCCCUGCGGCUGCAAC   524 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329806 (LOC4329806), mRNA	uncharacterized LOC4329806(LOC4329806)	coding protein	psRNATarget
AK058993.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   *||*||=||||||||||||* targets:164   UCUCUCUCUGCUGCUGCAAG   183 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-020-F11, full insert sequence	NA	coding protein	psRNATarget
CT831135.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   *||*||=||||||||||||* targets:436   UCUCUCUCUGCUGCUGCAAG   455 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA024F23, full insert sequence	NA	coding protein	psRNATarget
AK100797.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   *||*||=||||||||||||* targets:455   UCUCUCUCUGCUGCUGCAAG   474 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023121F15, full insert sequence	NA	coding protein	psRNATarget
XM_015793064.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   *||*||=||||||||||||* targets:484   UCUCUCUCUGCUGCUGCAAG   503 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group NADH-ubiquinone oxidoreductase 20.9 kDa subunit (LOC4345641), mRNA	NADH-ubiquinone oxidoreductase 20.9 kDa subunit(LOC4345641)	coding protein	psRNATarget
CT831134.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   *||*||=||||||||||||* targets:573   UCUCUCUCUGCUGCUGCAAG   592 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014B16, full insert sequence	NA	coding protein	psRNATarget
AK241368.1	ncRNA:20   UGACAGGGACGACGACGUUG   1   **|||*|||||||||||||= targets:1457   UAUGUACCUGCUGCUGCAAU   1476 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J065152P04, full insert sequence	NA	coding protein	psRNATarget