ncRNA ID | osa-miRf11209-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCAGUUUCAUCUGCUUGUGG - NA |
Stem-loop(if miRNA) |
     A    U  G  C         -              -----GAGU   UAUUAGGUGAG GUGCA CCAU AG AG UGAAGCUGC CAGCAUGAUCUGAU         GCU           G ||||| |||| || || ||||||||| ||||||||||||||         ||| CACGU GGUG UC UC ACUUUGACG GUCGUACUAGACUA         CCG           G      C    U  G  U         U              GAAACAAAA   UCAGUUAAGAC |
Stem-loop sequence | GUGCAACCAUUAGGAGCUGAAGCUGCCAGCAUGAUCUGAUGAGUGCUUAUUAGGUGAGGGCAGAAUUGACUGCCAAAACAAAGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUUGUGGCUGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK073398.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033045F02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015769211.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329435 (LOC4329435), mRNA | uncharacterized LOC4329435(LOC4329435) | coding protein | psRNATarget | |||||||||
XM_015756590.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 33 (LOC4347909), mRNA | U-box domain-containing protein 33(LOC4347909) | coding protein | psRNATarget |