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BaseInfo

ncRNA ID osa-miRf11209-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UGCAGUUUCAUCUGCUUGUGG - NA
Stem-loop(if miRNA)      A    U  G  C         -              -----GAGU   UAUUAGGUGAG
GUGCA CCAU AG AG UGAAGCUGC CAGCAUGAUCUGAU         GCU           G
||||| |||| || || ||||||||| ||||||||||||||         |||
CACGU GGUG UC UC ACUUUGACG GUCGUACUAGACUA         CCG           G
     C    U  G  U         U              GAAACAAAA   UCAGUUAAGAC
Stem-loop sequence GUGCAACCAUUAGGAGCUGAAGCUGCCAGCAUGAUCUGAUGAGUGCUUAUUAGGUGAGGGCAGAAUUGACUGCCAAAACAAAGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUUGUGGCUGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK073398.1
ncRNA:21   GGUGUUCGUCUACUUUGACGU   1
  ||||=||||||||||=|||||
targets:764   CCACGAGCAGAUGAAGCUGCA   784

2.5 Oryza sativa Japonica Group cDNA clone:J033045F02, full insert sequence NA coding protein psRNATarget
XM_015769211.1
ncRNA:21   GGUGUUCGUCUACUUUGACGU   1
  ||||=||||||||||=|||||
targets:821   CCACGAGCAGAUGAAGCUGCA   841

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329435 (LOC4329435), mRNA uncharacterized LOC4329435(LOC4329435) coding protein psRNATarget
XM_015756590.1
ncRNA:21   GGUGUUCGUCUACUUUGACGU   1
  *||||||*|||||||*|||||
targets:317   ACACAAGAAGAUGAACCUGCA   337

2.5 PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 33 (LOC4347909), mRNA U-box domain-containing protein 33(LOC4347909) coding protein psRNATarget