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BaseInfo

ncRNA ID osa-miRf11207-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - ACCAUGAGGUAUCGGUACCCCGA - NA
Stem-loop(if miRNA)          C   A               C   A             U      AG     ACAAU   C
UAAAAAUAC UCG GGUACCGGUACCUCA GGU UUAAAUCAUUUCU AUCGUU  AUCUA     ACG A
||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||  |||||     ||| U
AUUUUUAUG AGC CCAUGGCUAUGGAGU CCA AGUUUAGUAAAGG UAGCAA  UAGAU     UGU U
         A   C               A   C             C      CU     CAACC   C
Stem-loop sequence UAAAAAUACCUCGAGGUACCGGUACCUCACGGUAUUAAAUCAUUUCUUAUCGUUAGAUCUAACAAUACGCAUUCUGUCCAACUAGAUUCAACGAUCGGAAAUGAUUUGACACCAUGAGGUAUCGGUACCCCGAAGUAUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015786123.1
ncRNA:23   AGCCCCAUGGCUAUGGAGUACCA   1
  |||*|||||||||||||||*|||
targets:637   UCGAGGUACCGAUACCUCACGGU   659

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA uncharacterized LOC4340617(LOC4340617) coding protein psRNATarget
AK287529.1
ncRNA:23   AGCCCCAUGGCUAUGGAGUACCA   1
  |||*|||||||||||||||*|||
targets:148   UCGAGGUACCGAUACCUCACGGU   170

1.5 Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence NA coding protein psRNATarget
AK240791.1
ncRNA:23   AGCCCCAUGGCUAUGGAGUACCA   1
  |||*|||||||||||||||*|||
targets:148   UCGAGGUACCGAUACCUCACGGU   170

1.5 Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence NA coding protein psRNATarget
AK100297.1
ncRNA:23   AGCCCCAUGGCUAUGGAGUACCA   1
  |||*|*|||||||||||||*|||
targets:1309   UCGAGAUACCGAUACCUCACGGU   1331

2.5 Oryza sativa Japonica Group cDNA clone:J023077B14, full insert sequence NA coding protein psRNATarget
XM_015793616.1
ncRNA:23   AGCCCCAUGGCUAUGGAGUACCA   1
  |||*|*|||||||||||||*|||
targets:1484   UCGAGAUACCGAUACCUCACGGU   1506

2.5 PREDICTED: Oryza sativa Japonica Group probable auxin efflux carrier component 4 (LOC4346116), mRNA probable auxin efflux carrier component 4(LOC4346116) coding protein psRNATarget