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BaseInfo

ncRNA ID	osa-miRf11204-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGAGAUCCCUGACUUUGUGC - NA
Stem-loop(if miRNA)	A   -     -                                 GA   CAGUGGCAUAAC GGAA GAG AUCCC UGACUUUGUGCAGUUUGCAGUUAUGCCACUGGU  CAC            A |||| ||| ||||| |||||||||||||||||||||||||||||||||  ||| CCUU CUC UAGGG ACUGAAACACGUCAAACGUCAAUACGGUGACCA  CGU            C     A   C     G                                 AA   CAAUACGGUGAC
Stem-loop sequence	GGAAAGAGAUCCCUGACUUUGUGCAGUUUGCAGUUAUGCCACUGGUGACACCAGUGGCAUAACACCAGUGGCAUAACUGCAAACCAGUGGCAUAACUGCAAACUGCACAAAGUCAGGGGAUCCUCAUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT829968.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   |||||||*|||||||||||* targets:626   GCACAAAUUCAGGGAUCUCC   645 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN091I24, full insert sequence	NA	coding protein	psRNATarget
CT829967.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   |||||||*|||||||||||* targets:611   GCACAAAUUCAGGGAUCUCC   630 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN074N16, full insert sequence	NA	coding protein	psRNATarget
AK062669.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   |||||||*|||||||||||* targets:619   GCACAAAUUCAGGGAUCUCC   638 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-105-G02, full insert sequence	NA	coding protein	psRNATarget
XM_015755391.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   |||||||*|||||||||||* targets:665   GCACAAAUUCAGGGAUCUCC   684 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347400 (LOC4347400), mRNA	uncharacterized LOC4347400(LOC4347400)	coding protein	psRNATarget
AK241722.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   |*||||=||||||||||||* targets:2040   GAACAAGGUCAGGGAUCUCC   2059 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J065198L02, full insert sequence	NA	coding protein	psRNATarget
AK067954.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   ||=||**||||||||||||| targets:279   GCGCACCGUCAGGGAUCUCU   298 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013128J21, full insert sequence	NA	coding protein	psRNATarget
XM_015758745.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   ||=||**||||||||||||| targets:281   GCGCACCGUCAGGGAUCUCU   300 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349466 (LOC4349466), transcript variant X3, mRNA	uncharacterized LOC4349466(LOC4349466)	coding protein	psRNATarget
XM_015758744.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   ||=||**||||||||||||| targets:281   GCGCACCGUCAGGGAUCUCU   300 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349466 (LOC4349466), transcript variant X2, mRNA	uncharacterized LOC4349466(LOC4349466)	coding protein	psRNATarget
XM_015758743.1	ncRNA:20   CGUGUUUCAGUCCCUAGAGA   1   ||=||**||||||||||||| targets:281   GCGCACCGUCAGGGAUCUCU   300 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349466 (LOC4349466), transcript variant X1, mRNA	uncharacterized LOC4349466(LOC4349466)	coding protein	psRNATarget