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BaseInfo

ncRNA ID osa-miRf11181-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCUGCUCCAGUGGAGAAGCA - NA
Stem-loop(if miRNA)   U G         U    -           GUUA   G AAUGG  G
UC G AUGGUCUGC CCAG UGGAGAAGCAA    CGA U     GG A
|| | ||||||||| |||| |||||||||||    ||| |     ||
AG C UAUUAGACG GGUC ACUUCUUCGUU    GCU A     CC A
  U G         U    U           ---G   G -----  A
Stem-loop sequence UCUGGAUGGUCUGCUCCAGUGGAGAAGCAAGUUACGAGUAAUGGGGGAAACCAGUCGGUUGCUUCUUCAUCUGGUGCAGAUUAUGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK059887.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:7   UUCUUCUCCACUCGAGCAGA   26

2.5 Oryza sativa Japonica Group cDNA clone:006-208-B12, full insert sequence NA coding protein psRNATarget
AK069898.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:93   UUCUUCUCCACUCGAGCAGA   112

2.5 Oryza sativa Japonica Group cDNA clone:J023036E18, full insert sequence NA coding protein psRNATarget
XM_015772254.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:92   UUCUUCUCCACUCGAGCAGA   111

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X7, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772256.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:86   UUCUUCUCCACUCGAGCAGA   105

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X9, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772253.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:92   UUCUUCUCCACUCGAGCAGA   111

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X6, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772252.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:93   UUCUUCUCCACUCGAGCAGA   112

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X5, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772251.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:93   UUCUUCUCCACUCGAGCAGA   112

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X4, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772250.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:94   UUCUUCUCCACUCGAGCAGA   113

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X3, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772249.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:95   UUCUUCUCCACUCGAGCAGA   114

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X2, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772247.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:94   UUCUUCUCCACUCGAGCAGA   113

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X1, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
XM_015772255.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  |*||||||||||*|||||||
targets:95   UUCUUCUCCACUCGAGCAGA   114

2.5 PREDICTED: Oryza sativa Japonica Group putative 12-oxophytodienoate reductase 8 (LOC4329684), transcript variant X8, mRNA putative 12-oxophytodienoate reductase 8(LOC4329684) coding protein psRNATarget
AK104994.2
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  **|||||||||*||||||||
targets:45   GUCUUCUCCACCGGAGCAGA   64

2.5 Oryza sativa Japonica Group cDNA clone:001-002-H11, full insert sequence NA coding protein psRNATarget
AK100598.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  **|||||||||*||||||||
targets:43   GUCUUCUCCACCGGAGCAGA   62

2.5 Oryza sativa Japonica Group cDNA clone:J023107C01, full insert sequence NA coding protein psRNATarget
XM_015784170.1
ncRNA:20   ACGAAGAGGUGACCUCGUCU   1
  **|||||||||*||||||||
targets:54   GUCUUCUCCACCGGAGCAGA   73

2.5 PREDICTED: Oryza sativa Japonica Group trans-cinnamate 4-monooxygenase (LOC4338409), mRNA trans-cinnamate 4-monooxygenase(LOC4338409) coding protein psRNATarget
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