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BaseInfo

ncRNA ID	ath-miRf10166-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGACCUUGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	G   A                     -     G -    GUGAUUGUUAGGUGGUAGAGGUGAAGACACUCGACCAGGGGGACGAGUGAUG GU AAG CACUCGACCUCGGGGUCGAGU GAAGU A ACGA                                                    A || ||| ||||||||||||||||||||| ||||| | |||| CA UUU GUGAGCUGGGGUUCCAGCUCA CUUCG A UUCU                                                    G   G   G                     U     A G    GGAAGUUUCUGGUGAGCUGGGGGUCCAGCUCAUCCCCUGAAGAGCUAAAGUA
Stem-loop sequence	GUGAAGACACUCGACCUCGGGGUCGAGUGAAGUGAACGAGUGAUUGUUAGGUGGUAGAGGUGAAGACACUCGACCAGGGGGACGAGUGAUGAGAUGAAAUCGAGAAGUCCCCUACUCGACCUGGGGGUCGAGUGGUCUUUGAAGGUCUUGAAGCUUCUACUCGACCUUGGGGUCGAGUGGUUUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   |||||||||||||=|||||| targets:853   ACCACUCGACCCCGAGGUCG   872 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   ||||||||||||||*||||| targets:534   ACCACUCGACCCCAUGGUCG   553 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   |||||||||||||*|||||| targets:1103   ACCACUCGACCCCCAGGUCG   1122 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   |=|||||||||||=|||||| targets:1616   AUCACUCGACCCCGAGGUCG   1635 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   |*|||||||||||=|||||| targets:1058   AGCACUCGACCCCGAGGUCG   1077 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:20   UGGUGAGCUGGGGUUCCAGC   1   *|=||||||||||*|||||| targets:186   UCUACUCGACCCCCAGGUCG   205 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget