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BaseInfo

ncRNA ID	osa-miRf11172-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - AAAAGUGCACCAAAGGUCCCUCAA - NA
Stem-loop(if miRNA)	C              C GUAUUU CGAUGACAAGUUGAGGGACCUU GGUGUACUUUUUCC C      U |||||||||||||||||||||| |||||||||||||| |      A GCUACUGUUCAACUCCCUGGAA CCACGUGAAAAAGG G      U                       A              C AACUUU
Stem-loop sequence	CGAUGACAAGUUGAGGGACCUUCGGUGUACUUUUUCCCCGUAUUUUAUUUUCAAGCGGAAAAAGUGCACCAAAGGUCCCUCAACUUGUCAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015778861.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||||||||| targets:1581   UUGAGGGACCUUUGGUGCACUUUU   1604 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL45-like (LOC107278612), mRNA	RING-H2 finger protein ATL45-like(LOC107278612)	coding protein	psRNATarget
AK064775.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||||||||| targets:1106   UUGAGGGACCUUUGGUGCACUUUU   1129 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013000A24, full insert sequence	NA	coding protein	psRNATarget
XM_015789933.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:985   UUGAGGGACCUUUGGUGUACUUUU   1008 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable purine permease 11 (LOC4324577), transcript variant X1, mRNA	probable purine permease 11(LOC4324577)	coding protein	psRNATarget
AK099424.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:988   UUGAGGGACCUUUGGUGUACUUUU   1011 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013008N09, full insert sequence	NA	coding protein	psRNATarget
AK241694.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:1019   UUGAGGGACCUUUGGUGUACUUUU   1042 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065195M10, full insert sequence	NA	coding protein	psRNATarget
AK069402.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:1167   UUGAGGGACCUUUGGUGUACUUUU   1190 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023011C17, full insert sequence	NA	coding protein	psRNATarget
AK073603.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:1351   UUGAGGGACCUUUGGUGUACUUUU   1374 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033052N01, full insert sequence	NA	coding protein	psRNATarget
XM_015756699.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:207   UUGAGGGACCUUUGGUGUACUUUU   230 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347656 (LOC4347656), transcript variant X1, mRNA	uncharacterized LOC4347656(LOC4347656)	coding protein	psRNATarget
XM_015756702.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:207   UUGAGGGACCUUUGGUGUACUUUU   230 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347656 (LOC4347656), transcript variant X3, mRNA	uncharacterized LOC4347656(LOC4347656)	coding protein	psRNATarget
XM_015756701.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:207   UUGAGGGACCUUUGGUGUACUUUU   230 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347656 (LOC4347656), transcript variant X2, mRNA	uncharacterized LOC4347656(LOC4347656)	coding protein	psRNATarget
XM_015760086.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:18   UUGAGGGACCUUUGGUGUACUUUU   41 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group DJ-1 protein homolog E (LOC4350819), mRNA	DJ-1 protein homolog E(LOC4350819)	coding protein	psRNATarget
AK288529.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||||||||||||||||=|||||| targets:1764   UUGAGGGACCUUUGGUGUACUUUU   1787 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090044M17, full insert sequence	NA	coding protein	psRNATarget
XM_015759833.1	ncRNA:24   AACUCCCUGGAAACCACGUGAAAA   1   |||=|||||||||||||=|||||| targets:210   UUGGGGGACCUUUGGUGUACUUUU   233 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group wiskott-Aldrich syndrome protein family member 2 (LOC4349579), transcript variant X1, mRNA	wiskott-Aldrich syndrome protein family member 2(LOC4349579)	coding protein	psRNATarget
XM_015762317.1	ncRNA:24   AACU---CCCUGGAAACCACGUGAAAA   1   *|||---|||||||||||||=|||||| targets:378   AUGACAAGGGACCUUUGGUGUACUUUU   404 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349538 (LOC4349538), transcript variant X3, mRNA	uncharacterized LOC4349538(LOC4349538)	coding protein	psRNATarget
XM_015762316.1	ncRNA:24   AACU---CCCUGGAAACCACGUGAAAA   1   *|||---|||||||||||||=|||||| targets:378   AUGACAAGGGACCUUUGGUGUACUUUU   404 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349538 (LOC4349538), transcript variant X1, mRNA	uncharacterized LOC4349538(LOC4349538)	coding protein	psRNATarget