ncRNA ID | osa-miRf11170-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGCAUGCAUCUGCAUGUGCC - NA |
Stem-loop(if miRNA) |
GAGGA   -       GA               AGCU    --------AGACA  C   - CCACAAGUCCUCAUG      CGC UGGCAUG  UGGAUGCAUGCAUGC    AGCU             GA GAC U               C      ||| |||||||  |||||||||||||||    ||||             || ||| |      GUG ACCGUGU  GUCUACGUACGUACG    UCGA             GC ACG U               A -CUAA   U       AC               --GU    GCAAAAAUUUCCC  -   G ACGUACGUACGUGCU |
Stem-loop sequence | GAGGACGCUGGCAUGGAUGGAUGCAUGCAUGCAGCUAGCUAGACAGACGACUCCACAAGUCCUCAUGCAUCGUGCAUGCAUGCAUGGCACGCCCUUUAAAAACGAGCUUGGCAUGCAUGCAUCUGCAUGUGCCAUGUGAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AF435643.1 |
|
2.5 | Oryza sativa CSLA7 mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
XM_015768790.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4330788 (LOC4330788), mRNA | uncharacterized LOC4330788(LOC4330788) | coding protein | psRNATarget | |||||||||
AK111266.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-180-F07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015760341.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable transcriptional regulator RABBIT EARS (LOC9271775), mRNA | probable transcriptional regulator RABBIT EARS(LOC9271775) | coding protein | psRNATarget |