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BaseInfo

ncRNA ID osa-miRf11168-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GGAUGCCAUGACCUCGUCCUAG - NA
Stem-loop(if miRNA)    C              A   A           AUU   U  G
GUU CAUCUAGGAUGAGG CGU GCAUCCUAUUA   UCG GU A
||| |||||||||||||| ||| |||||||||||   ||| ||
CAA GUGGAUCCUGCUCC GUA CGUAGGAUAAU   AGU CG U
   A              A   C           ---   -  A
Stem-loop sequence GUUCCAUCUAGGAUGAGGACGUAGCAUCCUAUUAAUUUCGUGUGAUAGCUGAUAAUAGGAUGCCAUGACCUCGUCCUAGGUGAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK111521.1
ncRNA:22   GAUCCUGCUCCAGUACCGUAGG   1
  ||||||*||||||||||||*||
targets:184   CUAGGAGGAGGUCAUGGCAGCC   205

2.5 Oryza sativa Japonica Group cDNA clone:J013002M10, full insert sequence NA coding protein psRNATarget
XM_015765149.1
ncRNA:22   GAUCCUGCUCCAGUACCGUAGG   1
  ||||||*||||||||||||*||
targets:233   CUAGGAGGAGGUCAUGGCAGCC   254

2.5 PREDICTED: Oryza sativa Japonica Group chloroplast stem-loop binding protein of 41 kDa b, chloroplastic (LOC4352083), mRNA chloroplast stem-loop binding protein of 41 kDa b, chloroplastic(LOC4352083) coding protein psRNATarget
AK107236.1
ncRNA:22   GAUCCUGCUCCAGUACCGUAGG   1
  *||*|||||||||||||*||||
targets:781   GUAUGACGAGGUCAUGGGAUCC   802

2.5 Oryza sativa Japonica Group cDNA clone:002-125-E12, full insert sequence NA coding protein psRNATarget
XM_015777664.1
ncRNA:22   GAUCCUGCUCCAGUACCGUAGG   1
  =|*|||=||*||||||||||||
targets:2087   UUUGGAUGACGUCAUGGCAUCC   2108

2.5 PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein At1g30440-like (LOC107280491), mRNA BTB/POZ domain-containing protein At1g30440-like(LOC107280491) coding protein psRNATarget