ncRNA ID | novel_xso_miR3 |
Species | Xanthoceras sorbifolium |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 21 |
Mature sequence(if miRNA) | 3550 - AAGGCAGACCAACAACAGGUC - 3570 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                A   GAA   CCUGUUGUUGGUCUGCCUUUGCGCCAGCAUUUUGCCUCACAAGAGAGCAUCUAUGAAGCUGAUAUGGCCGUUGCAAGAUUUAUGUAUGAUGCUGGUUUACCAUUCUCUGCUGCAAAUUCUUGUUUUUUCCAACAGAUGGCUGAUGCUGUUGCUGCUGUGGGCCCUGGUUAUAAGAUGCCUUCUUAUCACUCUCUGAGGAGCAAGUUGUUGAACAGAGUAGCUCAAGAUGCAGGAGCAUAUUGUGAAGAACUGAAAAAUACCUGGGAGGUGACUGGGUGUUCGAUAUUAGUUGAUAGGUGGAUGGAUAGAACUGGUCGUACAGUCAUAAACUUUUUUGUUUAUUGCACAAAAGGAACCAUGUUCCUCAAAUCUGUUGAUGCAUCAGACAUCACAAAUUCUGCUGAAGCACUUUUGAAUUUGUUUGAUAGCAUUGUUCAAGAAGUUGGACCCAAGAAUAUUGUAAAUUUUGUGACAGAUACUAGUUAUAGAACUGCAGGAAAGCUCUUGAUGAGUAAGUAUAAAACCUUUUUCUGCAGCACCUGUGGAAUGCAGUGUAUCGAUAUAAUGCUUGAGGAAAUUGGAAGAAUCGAUGAAGUGAACGAGGUUUUAGCAAAGGCUAAAAGAGUAACACGGUUCAUAUAUAACAAUGCAUGGGUCCUCAAUCUAAUGAAAAAGAAAACUGGUGGAAGGGAUAUUUUUCAGGUUGCAAUUACAAGAUUUGCUUCCAUCUUCUUGACACUAGAAAAUAUUUUAUCUUUGAAGGACCGUCUUCAUCGGAUGUUUACUAGUAAGGCUUGGACACAGUCGAGUUUUUCUAAGCAAAGGACAGGGCUUGAGGUAGCAGAAAUCAUUUUAGACCCUCUUUUCUGGUCUUUUUGUGACCAAACUCUGAAGGUCACGAAGCCUUUACUUUCUGUUUUACAUCUUAUGGAAUCUGAAGAAAGACCAUCUGUGGGAUAUAUAUAUGAUGCUAUGGAAAAAGCUAAGAAAAUUAUCAUUGAGGCAUUUGAUGAUAAGGAAUUCGAUUUGAUGCCAUAUUUGAAGGUUAUUGAUCAUAUAUGGCAAGAGGAAUUCCACAGCCCUCUUCAUGCAGCUGCUUACUAUCUCAACCCGUCUGUAUUUUAUAACCGUAGCUUCUCCUCUAACAAAGUCAUCCAAAAGGGCUUACUUGAUUGCAUUGAAAUUCUAGAGCCUAACUUGUCAGCCCAAAUUAUGAUUACAAGCCACAUAAAUUUUUAUGAGGAAUCUGUGGGAGAUUUUGGUCGACCUGUGGCUUUACGUAGUCGAGAGUCAUUGGCCCCAGCUACUUGGUGGUCGUUGUAUGCAGCCGAUUACCCGGAAUUGCAGAGGUUAGCUAUCAGGAUUUUAAGUCAAACAUGUAGCAUCACCAGAUGUAGAAGGACUUGGAGCAUGUUUGAACGUAUCCAUUUGAAGAGGAGGAAUCGGUUGGAGCACCAAAGGUUGAAUGAUCUCAUAUUUGUUCACUAUAACCUGCACCUUCAACAGAGGCAAGCAGAAGCAGUUAAAGCCAGGUGUUCGAAAGGAACACUUGAUCCUAUUUGCUUAGAAGCUAUGGAUACAAACAUUGGAGAUUGGGUGGAGGAUAUGGGAUCCGUGGAGGGUGAGGAUCUUAGCUGGAUGGAUGUUAGUGGUCCGAGUGAGCGGACAUUUUUCAGUCAUGAAGUCCAAAAUAUGGAUGAUUCUGUUGACAGUACAGAGGACAGAAGCAGAAAUGCCACGAAAGGUAUUGAUGGAAGUGAUGAUAUAUAGUGCUUU UAA   C   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   GGACAACAACCAGACGGAAACGCGGUCGUAAAACGGAGUGUUCUCUCGUAGAUACUUCGACUAUACCGGCAACGUUCUAAAUACAUACUACGACCAAAUGGUAAGAGACGACGUUUAAGAACAAAAAAGGUUGUCUACCGACUACGACAACGACGACACCCGGGACCAAUAUUCUACGGAAGAAUAGUGAGAGACUCCUCGUUCAACAACUUGUCUCAUCGAGUUCUACGUCCUCGUAUAACACUUCUUGACUUUUUAUGGACCCUCCACUGACCCACAAGCUAUAAUCAACUAUCCACCUACCUAUCUUGACCAGCAUGUCAGUAUUUGAAAAAACAAAUAACGUGUUUUCCUUGGUACAAGGAGUUUAGACAACUACGUAGUCUGUAGUGUUUAAGACGACUUCGUGAAAACUUAAACAAACUAUCGUAACAAGUUCUUCAACCUGGGUUCUUAUAACAUUUAAAACACUGUCUAUGAUCAAUAUCUUGACGUCCUUUCGAGAACUACUCAUUCAUAUUUUGGAAAAAGACGUCGUGGACACCUUACGUCACAUAGCUAUAUUACGAACUCCUUUAACCUUCUUAGCUACUUCACUUGCUCCAAAAUCGUUUCCGAUUUUCUCAUUGUGCCAAGUAUAUAUUGUUACGUACCCAGGAGUUAGAUUACUUUUUCUUUUGACCACCUUCCCUAUAAAAAGUCCAACGUUAAUGUUCUAAACGAAGGUAGAAGAACUGUGAUCUUUUAUAAAAUAGAAACUUCCUGGCAGAAGUAGCCUACAAAUGAUCAUUCCGAACCUGUGUCAGCUCAAAAAGAUUCGUUUCCUGUCCCGAACUCCAUCGUCUUUAGUAAAAUCUGGGAGAAAAGACCAGAAAAACACUGGUUUGAGACUUCCAGUGCUUCGGAAAUGAAAGACAAAAUGUAGAAUACCUUAGACUUCUUUCUGGUAGACACCCUAUAUAUAUACUACGAUACCUUUUUCGAUUCUUUUAAUAGUAACUCCGUAAACUACUAUUCCUUAAGCUAAACUACGGUAUAAACUUCCAAUAACUAGUAUAUACCGUUCUCCUUAAGGUGUCGGGAGAAGUACGUCGACGAAUGAUAGAGUUGGGCAGACAUAAAAUAUUGGCAUCGAAGAGGAGAUUGUUUCAGUAGGUUUUCCCGAAUGAACUAACGUAACUUUAAGAUCUCGGAUUGAACAGUCGGGUUUAAUACUAAUGUUCGGUGUAUUUAAAAAUACUCCUUAGACACCCUCUAAAACCAGCUGGACACCGAAAUGCAUCAGCUCUCAGUAACCGGGGUCGAUGAACCACCAGCAACAUACGUCGGCUAAUGGGCCUUAACGUCUCCAAUCGAUAGUCCUAAAAUUCAGUUUGUACAUCGUAGUGGUCUACAUCUUCCUGAACCUCGUACAAACUUGCAUAGGUAAACUUCUCCUCCUUAGCCAACCUCGUGGUUUCCAACUUACUAGAGUAUAAACAAGUGAUAUUGGACGUGGAAGUUGUCUCCGUUCGUCUUCGUCAAUUUCGGUCCACAAGCUUUCCUUGUGAACUAGGAUAAACGAAUCUUCGAUACCUAUGUUUGUAACCUCUAACCCACCUCCUAUACCCUAGGCACCUCCCACUCCUAGAAUCGACCUACCUACAAUCACCAGGCUCACUCGCCUGUAAAAAGUCAGUACUUCAGGUUUUAUACCUACUAAGACAACUGUCAUGUCUCCUGUCUUCGUCUUUACGGUGCUUUCCAUAACUACCUUCACUACUAUAUAUCACGAAA AUU   A CU                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                A   AUA |
Stem-loop sequence | CCUGUUGUUGGUCUGCCUUUGCGCCAGCAUUUUGCCUCACAAGAGAGCAUCUAUGAAGCUGAUAUGGCCGUUGCAAGAUUUAUGUAUGAUGCUGGUUUACCAUUCUCUGCUGCAAAUUCUUGUUUUUUCCAACAGAUGGCUGAUGCUGUUGCUGCUGUGGGCCCUGGUUAUAAGAUGCCUUCUUAUCACUCUCUGAGGAGCAAGUUGUUGAACAGAGUAGCUCAAGAUGCAGGAGCAUAUUGUGAAGAACUGAAAAAUACCUGGGAGGUGACUGGGUGUUCGAUAUUAGUUGAUAGGUGGAUGGAUAGAACUGGUCGUACAGUCAUAAACUUUUUUGUUUAUUGCACAAAAGGAACCAUGUUCCUCAAAUCUGUUGAUGCAUCAGACAUCACAAAUUCUGCUGAAGCACUUUUGAAUUUGUUUGAUAGCAUUGUUCAAGAAGUUGGACCCAAGAAUAUUGUAAAUUUUGUGACAGAUACUAGUUAUAGAACUGCAGGAAAGCUCUUGAUGAGUAAGUAUAAAACCUUUUUCUGCAGCACCUGUGGAAUGCAGUGUAUCGAUAUAAUGCUUGAGGAAAUUGGAAGAAUCGAUGAAGUGAACGAGGUUUUAGCAAAGGCUAAAAGAGUAACACGGUUCAUAUAUAACAAUGCAUGGGUCCUCAAUCUAAUGAAAAAGAAAACUGGUGGAAGGGAUAUUUUUCAGGUUGCAAUUACAAGAUUUGCUUCCAUCUUCUUGACACUAGAAAAUAUUUUAUCUUUGAAGGACCGUCUUCAUCGGAUGUUUACUAGUAAGGCUUGGACACAGUCGAGUUUUUCUAAGCAAAGGACAGGGCUUGAGGUAGCAGAAAUCAUUUUAGACCCUCUUUUCUGGUCUUUUUGUGACCAAACUCUGAAGGUCACGAAGCCUUUACUUUCUGUUUUACAUCUUAUGGAAUCUGAAGAAAGACCAUCUGUGGGAUAUAUAUAUGAUGCUAUGGAAAAAGCUAAGAAAAUUAUCAUUGAGGCAUUUGAUGAUAAGGAAUUCGAUUUGAUGCCAUAUUUGAAGGUUAUUGAUCAUAUAUGGCAAGAGGAAUUCCACAGCCCUCUUCAUGCAGCUGCUUACUAUCUCAACCCGUCUGUAUUUUAUAACCGUAGCUUCUCCUCUAACAAAGUCAUCCAAAAGGGCUUACUUGAUUGCAUUGAAAUUCUAGAGCCUAACUUGUCAGCCCAAAUUAUGAUUACAAGCCACAUAAAUUUUUAUGAGGAAUCUGUGGGAGAUUUUGGUCGACCUGUGGCUUUACGUAGUCGAGAGUCAUUGGCCCCAGCUACUUGGUGGUCGUUGUAUGCAGCCGAUUACCCGGAAUUGCAGAGGUUAGCUAUCAGGAUUUUAAGUCAAACAUGUAGCAUCACCAGAUGUAGAAGGACUUGGAGCAUGUUUGAACGUAUCCAUUUGAAGAGGAGGAAUCGGUUGGAGCACCAAAGGUUGAAUGAUCUCAUAUUUGUUCACUAUAACCUGCACCUUCAACAGAGGCAAGCAGAAGCAGUUAAAGCCAGGUGUUCGAAAGGAACACUUGAUCCUAUUUGCUUAGAAGCUAUGGAUACAAACAUUGGAGAUUGGGUGGAGGAUAUGGGAUCCGUGGAGGGUGAGGAUCUUAGCUGGAUGGAUGUUAGUGGUCCGAGUGAGCGGACAUUUUUCAGUCAUGAAGUCCAAAAUAUGGAUGAUUCUGUUGACAGUACAGAGGACAGAAGCAGAAAUGCCACGAAAGGUAUUGAUGGAAGUGAUGAUAUAUAGUGCUUUAUAAGAACAAUAUUAAAAAGCACUAUAUAUCAUCACUUCCAUCAAUACCUUUCGUGGCAUUUCUGCUUCUGUCCUCUGUACUGUCAACAGAAUCAUCCAUAUUUUGGACUUCAUGACUGAAAAAUGUCCGCUCACUCGGACCACUAACAUCCAUCCAGCUAAGAUCCUCACCCUCCACGGAUCCCAUAUCCUCCACCCAAUCUCCAAUGUUUGUAUCCAUAGCUUCUAAGCAAAUAGGAUCAAGUGUUCCUUUCGAACACCUGGCUUUAACUGCUUCUGCUUGCCUCUGUUGAAGGUGCAGGUUAUAGUGAACAAAUAUGAGAUCAUUCAACCUUUGGUGCUCCAACCGAUUCCUCCUCUUCAAAUGGAUACGUUCAAACAUGCUCCAAGUCCUUCUACAUCUGGUGAUGCUACAUGUUUGACUUAAAAUCCUGAUAGCUAACCUCUGCAAUUCCGGGUAAUCGGCUGCAUACAACGACCACCAAGUAGCUGGGGCCAAUGACUCUCGACUACGUAAAGCCACAGGUCGACCAAAAUCUCCCACAGAUUCCUCAUAAAAAUUUAUGUGGCUUGUAAUCAUAAUUUGGGCUGACAAGUUAGGCUCUAGAAUUUCAAUGCAAUCAAGUAAGCCCUUUUGGAUGACUUUGUUAGAGGAGAAGCUACGGUUAUAAAAUACAGACGGGUUGAGAUAGUAAGCAGCUGCAUGAAGAGGGCUGUGGAAUUCCUCUUGCCAUAUAUGAUCAAUAACCUUCAAAUAUGGCAUCAAAUCGAAUUCCUUAUCAUCAAAUGCCUCAAUGAUAAUUUUCUUAGCUUUUUCCAUAGCAUCAUAUAUAUAUCCCACAGAUGGUCUUUCUUCAGAUUCCAUAAGAUGUAAAACAGAAAGUAAAGGCUUCGUGACCUUCAGAGUUUGGUCACAAAAAGACCAGAAAAGAGGGUCUAAAAUGAUUUCUGCUACCUCAAGCCCUGUCCUUUGCUUAGAAAAACUCGACUGUGUCCAAGCCUUACUAGUAAACAUCCGAUGAAGACGGUCCUUCAAAGAUAAAAUAUUUUCUAGUGUCAAGAAGAUGGAAGCAAAUCUUGUAAUUGCAACCUGAAAAAUAUCCCUUCCACCAGUUUUCUUUUUCAUUAGAUUGAGGACCCAUGCAUUGUUAUAUAUGAACCGUGUUACUCUUUUAGCCUUUGCUAAAACCUCGUUCACUUCAUCGAUUCUUCCAAUUUCCUCAAGCAUUAUAUCGAUACACUGCAUUCCACAGGUGCUGCAGAAAAAGGUUUUAUACUUACUCAUCAAGAGCUUUCCUGCAGUUCUAUAACUAGUAUCUGUCACAAAAUUUACAAUAUUCUUGGGUCCAACUUCUUGAACAAUGCUAUCAAACAAAUUCAAAAGUGCUUCAGCAGAAUUUGUGAUGUCUGAUGCAUCAACAGAUUUGAGGAACAUGGUUCCUUUUGUGCAAUAAACAAAAAAGUUUAUGACUGUACGACCAGUUCUAUCCAUCCACCUAUCAACUAAUAUCGAACACCCAGUCACCUCCCAGGUAUUUUUCAGUUCUUCACAAUAUGCUCCUGCAUCUUGAGCUACUCUGUUCAACAACUUGCUCCUCAGAGAGUGAUAAGAAGGCAUCUUAUAACCAGGGCCCACAGCAGCAACAGCAUCAGCCAUCUGUUGGAAAAAACAAGAAUUUGCAGCAGAGAAUGGUAAACCAGCAUCAUACAUAAAUCUUGCAACGGCCAUAUCAGCUUCAUAGAUGCUCUCUUGUGAGGCAAAAUGCUGGCGCAAAGGCAGACCAACAACAGGUC |