Search result

BaseInfo

ncRNA ID novel_xso_miR3
Species Xanthoceras sorbifolium
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 21
Mature sequence(if miRNA) 3550 - AAGGCAGACCAACAACAGGUC - 3570
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                A   GAA
  CCUGUUGUUGGUCUGCCUUUGCGCCAGCAUUUUGCCUCACAAGAGAGCAUCUAUGAAGCUGAUAUGGCCGUUGCAAGAUUUAUGUAUGAUGCUGGUUUACCAUUCUCUGCUGCAAAUUCUUGUUUUUUCCAACAGAUGGCUGAUGCUGUUGCUGCUGUGGGCCCUGGUUAUAAGAUGCCUUCUUAUCACUCUCUGAGGAGCAAGUUGUUGAACAGAGUAGCUCAAGAUGCAGGAGCAUAUUGUGAAGAACUGAAAAAUACCUGGGAGGUGACUGGGUGUUCGAUAUUAGUUGAUAGGUGGAUGGAUAGAACUGGUCGUACAGUCAUAAACUUUUUUGUUUAUUGCACAAAAGGAACCAUGUUCCUCAAAUCUGUUGAUGCAUCAGACAUCACAAAUUCUGCUGAAGCACUUUUGAAUUUGUUUGAUAGCAUUGUUCAAGAAGUUGGACCCAAGAAUAUUGUAAAUUUUGUGACAGAUACUAGUUAUAGAACUGCAGGAAAGCUCUUGAUGAGUAAGUAUAAAACCUUUUUCUGCAGCACCUGUGGAAUGCAGUGUAUCGAUAUAAUGCUUGAGGAAAUUGGAAGAAUCGAUGAAGUGAACGAGGUUUUAGCAAAGGCUAAAAGAGUAACACGGUUCAUAUAUAACAAUGCAUGGGUCCUCAAUCUAAUGAAAAAGAAAACUGGUGGAAGGGAUAUUUUUCAGGUUGCAAUUACAAGAUUUGCUUCCAUCUUCUUGACACUAGAAAAUAUUUUAUCUUUGAAGGACCGUCUUCAUCGGAUGUUUACUAGUAAGGCUUGGACACAGUCGAGUUUUUCUAAGCAAAGGACAGGGCUUGAGGUAGCAGAAAUCAUUUUAGACCCUCUUUUCUGGUCUUUUUGUGACCAAACUCUGAAGGUCACGAAGCCUUUACUUUCUGUUUUACAUCUUAUGGAAUCUGAAGAAAGACCAUCUGUGGGAUAUAUAUAUGAUGCUAUGGAAAAAGCUAAGAAAAUUAUCAUUGAGGCAUUUGAUGAUAAGGAAUUCGAUUUGAUGCCAUAUUUGAAGGUUAUUGAUCAUAUAUGGCAAGAGGAAUUCCACAGCCCUCUUCAUGCAGCUGCUUACUAUCUCAACCCGUCUGUAUUUUAUAACCGUAGCUUCUCCUCUAACAAAGUCAUCCAAAAGGGCUUACUUGAUUGCAUUGAAAUUCUAGAGCCUAACUUGUCAGCCCAAAUUAUGAUUACAAGCCACAUAAAUUUUUAUGAGGAAUCUGUGGGAGAUUUUGGUCGACCUGUGGCUUUACGUAGUCGAGAGUCAUUGGCCCCAGCUACUUGGUGGUCGUUGUAUGCAGCCGAUUACCCGGAAUUGCAGAGGUUAGCUAUCAGGAUUUUAAGUCAAACAUGUAGCAUCACCAGAUGUAGAAGGACUUGGAGCAUGUUUGAACGUAUCCAUUUGAAGAGGAGGAAUCGGUUGGAGCACCAAAGGUUGAAUGAUCUCAUAUUUGUUCACUAUAACCUGCACCUUCAACAGAGGCAAGCAGAAGCAGUUAAAGCCAGGUGUUCGAAAGGAACACUUGAUCCUAUUUGCUUAGAAGCUAUGGAUACAAACAUUGGAGAUUGGGUGGAGGAUAUGGGAUCCGUGGAGGGUGAGGAUCUUAGCUGGAUGGAUGUUAGUGGUCCGAGUGAGCGGACAUUUUUCAGUCAUGAAGUCCAAAAUAUGGAUGAUUCUGUUGACAGUACAGAGGACAGAAGCAGAAAUGCCACGAAAGGUAUUGAUGGAAGUGAUGAUAUAUAGUGCUUU UAA   C
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
  GGACAACAACCAGACGGAAACGCGGUCGUAAAACGGAGUGUUCUCUCGUAGAUACUUCGACUAUACCGGCAACGUUCUAAAUACAUACUACGACCAAAUGGUAAGAGACGACGUUUAAGAACAAAAAAGGUUGUCUACCGACUACGACAACGACGACACCCGGGACCAAUAUUCUACGGAAGAAUAGUGAGAGACUCCUCGUUCAACAACUUGUCUCAUCGAGUUCUACGUCCUCGUAUAACACUUCUUGACUUUUUAUGGACCCUCCACUGACCCACAAGCUAUAAUCAACUAUCCACCUACCUAUCUUGACCAGCAUGUCAGUAUUUGAAAAAACAAAUAACGUGUUUUCCUUGGUACAAGGAGUUUAGACAACUACGUAGUCUGUAGUGUUUAAGACGACUUCGUGAAAACUUAAACAAACUAUCGUAACAAGUUCUUCAACCUGGGUUCUUAUAACAUUUAAAACACUGUCUAUGAUCAAUAUCUUGACGUCCUUUCGAGAACUACUCAUUCAUAUUUUGGAAAAAGACGUCGUGGACACCUUACGUCACAUAGCUAUAUUACGAACUCCUUUAACCUUCUUAGCUACUUCACUUGCUCCAAAAUCGUUUCCGAUUUUCUCAUUGUGCCAAGUAUAUAUUGUUACGUACCCAGGAGUUAGAUUACUUUUUCUUUUGACCACCUUCCCUAUAAAAAGUCCAACGUUAAUGUUCUAAACGAAGGUAGAAGAACUGUGAUCUUUUAUAAAAUAGAAACUUCCUGGCAGAAGUAGCCUACAAAUGAUCAUUCCGAACCUGUGUCAGCUCAAAAAGAUUCGUUUCCUGUCCCGAACUCCAUCGUCUUUAGUAAAAUCUGGGAGAAAAGACCAGAAAAACACUGGUUUGAGACUUCCAGUGCUUCGGAAAUGAAAGACAAAAUGUAGAAUACCUUAGACUUCUUUCUGGUAGACACCCUAUAUAUAUACUACGAUACCUUUUUCGAUUCUUUUAAUAGUAACUCCGUAAACUACUAUUCCUUAAGCUAAACUACGGUAUAAACUUCCAAUAACUAGUAUAUACCGUUCUCCUUAAGGUGUCGGGAGAAGUACGUCGACGAAUGAUAGAGUUGGGCAGACAUAAAAUAUUGGCAUCGAAGAGGAGAUUGUUUCAGUAGGUUUUCCCGAAUGAACUAACGUAACUUUAAGAUCUCGGAUUGAACAGUCGGGUUUAAUACUAAUGUUCGGUGUAUUUAAAAAUACUCCUUAGACACCCUCUAAAACCAGCUGGACACCGAAAUGCAUCAGCUCUCAGUAACCGGGGUCGAUGAACCACCAGCAACAUACGUCGGCUAAUGGGCCUUAACGUCUCCAAUCGAUAGUCCUAAAAUUCAGUUUGUACAUCGUAGUGGUCUACAUCUUCCUGAACCUCGUACAAACUUGCAUAGGUAAACUUCUCCUCCUUAGCCAACCUCGUGGUUUCCAACUUACUAGAGUAUAAACAAGUGAUAUUGGACGUGGAAGUUGUCUCCGUUCGUCUUCGUCAAUUUCGGUCCACAAGCUUUCCUUGUGAACUAGGAUAAACGAAUCUUCGAUACCUAUGUUUGUAACCUCUAACCCACCUCCUAUACCCUAGGCACCUCCCACUCCUAGAAUCGACCUACCUACAAUCACCAGGCUCACUCGCCUGUAAAAAGUCAGUACUUCAGGUUUUAUACCUACUAAGACAACUGUCAUGUCUCCUGUCUUCGUCUUUACGGUGCUUUCCAUAACUACCUUCACUACUAUAUAUCACGAAA AUU   A
CU                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                A   AUA
Stem-loop sequence CCUGUUGUUGGUCUGCCUUUGCGCCAGCAUUUUGCCUCACAAGAGAGCAUCUAUGAAGCUGAUAUGGCCGUUGCAAGAUUUAUGUAUGAUGCUGGUUUACCAUUCUCUGCUGCAAAUUCUUGUUUUUUCCAACAGAUGGCUGAUGCUGUUGCUGCUGUGGGCCCUGGUUAUAAGAUGCCUUCUUAUCACUCUCUGAGGAGCAAGUUGUUGAACAGAGUAGCUCAAGAUGCAGGAGCAUAUUGUGAAGAACUGAAAAAUACCUGGGAGGUGACUGGGUGUUCGAUAUUAGUUGAUAGGUGGAUGGAUAGAACUGGUCGUACAGUCAUAAACUUUUUUGUUUAUUGCACAAAAGGAACCAUGUUCCUCAAAUCUGUUGAUGCAUCAGACAUCACAAAUUCUGCUGAAGCACUUUUGAAUUUGUUUGAUAGCAUUGUUCAAGAAGUUGGACCCAAGAAUAUUGUAAAUUUUGUGACAGAUACUAGUUAUAGAACUGCAGGAAAGCUCUUGAUGAGUAAGUAUAAAACCUUUUUCUGCAGCACCUGUGGAAUGCAGUGUAUCGAUAUAAUGCUUGAGGAAAUUGGAAGAAUCGAUGAAGUGAACGAGGUUUUAGCAAAGGCUAAAAGAGUAACACGGUUCAUAUAUAACAAUGCAUGGGUCCUCAAUCUAAUGAAAAAGAAAACUGGUGGAAGGGAUAUUUUUCAGGUUGCAAUUACAAGAUUUGCUUCCAUCUUCUUGACACUAGAAAAUAUUUUAUCUUUGAAGGACCGUCUUCAUCGGAUGUUUACUAGUAAGGCUUGGACACAGUCGAGUUUUUCUAAGCAAAGGACAGGGCUUGAGGUAGCAGAAAUCAUUUUAGACCCUCUUUUCUGGUCUUUUUGUGACCAAACUCUGAAGGUCACGAAGCCUUUACUUUCUGUUUUACAUCUUAUGGAAUCUGAAGAAAGACCAUCUGUGGGAUAUAUAUAUGAUGCUAUGGAAAAAGCUAAGAAAAUUAUCAUUGAGGCAUUUGAUGAUAAGGAAUUCGAUUUGAUGCCAUAUUUGAAGGUUAUUGAUCAUAUAUGGCAAGAGGAAUUCCACAGCCCUCUUCAUGCAGCUGCUUACUAUCUCAACCCGUCUGUAUUUUAUAACCGUAGCUUCUCCUCUAACAAAGUCAUCCAAAAGGGCUUACUUGAUUGCAUUGAAAUUCUAGAGCCUAACUUGUCAGCCCAAAUUAUGAUUACAAGCCACAUAAAUUUUUAUGAGGAAUCUGUGGGAGAUUUUGGUCGACCUGUGGCUUUACGUAGUCGAGAGUCAUUGGCCCCAGCUACUUGGUGGUCGUUGUAUGCAGCCGAUUACCCGGAAUUGCAGAGGUUAGCUAUCAGGAUUUUAAGUCAAACAUGUAGCAUCACCAGAUGUAGAAGGACUUGGAGCAUGUUUGAACGUAUCCAUUUGAAGAGGAGGAAUCGGUUGGAGCACCAAAGGUUGAAUGAUCUCAUAUUUGUUCACUAUAACCUGCACCUUCAACAGAGGCAAGCAGAAGCAGUUAAAGCCAGGUGUUCGAAAGGAACACUUGAUCCUAUUUGCUUAGAAGCUAUGGAUACAAACAUUGGAGAUUGGGUGGAGGAUAUGGGAUCCGUGGAGGGUGAGGAUCUUAGCUGGAUGGAUGUUAGUGGUCCGAGUGAGCGGACAUUUUUCAGUCAUGAAGUCCAAAAUAUGGAUGAUUCUGUUGACAGUACAGAGGACAGAAGCAGAAAUGCCACGAAAGGUAUUGAUGGAAGUGAUGAUAUAUAGUGCUUUAUAAGAACAAUAUUAAAAAGCACUAUAUAUCAUCACUUCCAUCAAUACCUUUCGUGGCAUUUCUGCUUCUGUCCUCUGUACUGUCAACAGAAUCAUCCAUAUUUUGGACUUCAUGACUGAAAAAUGUCCGCUCACUCGGACCACUAACAUCCAUCCAGCUAAGAUCCUCACCCUCCACGGAUCCCAUAUCCUCCACCCAAUCUCCAAUGUUUGUAUCCAUAGCUUCUAAGCAAAUAGGAUCAAGUGUUCCUUUCGAACACCUGGCUUUAACUGCUUCUGCUUGCCUCUGUUGAAGGUGCAGGUUAUAGUGAACAAAUAUGAGAUCAUUCAACCUUUGGUGCUCCAACCGAUUCCUCCUCUUCAAAUGGAUACGUUCAAACAUGCUCCAAGUCCUUCUACAUCUGGUGAUGCUACAUGUUUGACUUAAAAUCCUGAUAGCUAACCUCUGCAAUUCCGGGUAAUCGGCUGCAUACAACGACCACCAAGUAGCUGGGGCCAAUGACUCUCGACUACGUAAAGCCACAGGUCGACCAAAAUCUCCCACAGAUUCCUCAUAAAAAUUUAUGUGGCUUGUAAUCAUAAUUUGGGCUGACAAGUUAGGCUCUAGAAUUUCAAUGCAAUCAAGUAAGCCCUUUUGGAUGACUUUGUUAGAGGAGAAGCUACGGUUAUAAAAUACAGACGGGUUGAGAUAGUAAGCAGCUGCAUGAAGAGGGCUGUGGAAUUCCUCUUGCCAUAUAUGAUCAAUAACCUUCAAAUAUGGCAUCAAAUCGAAUUCCUUAUCAUCAAAUGCCUCAAUGAUAAUUUUCUUAGCUUUUUCCAUAGCAUCAUAUAUAUAUCCCACAGAUGGUCUUUCUUCAGAUUCCAUAAGAUGUAAAACAGAAAGUAAAGGCUUCGUGACCUUCAGAGUUUGGUCACAAAAAGACCAGAAAAGAGGGUCUAAAAUGAUUUCUGCUACCUCAAGCCCUGUCCUUUGCUUAGAAAAACUCGACUGUGUCCAAGCCUUACUAGUAAACAUCCGAUGAAGACGGUCCUUCAAAGAUAAAAUAUUUUCUAGUGUCAAGAAGAUGGAAGCAAAUCUUGUAAUUGCAACCUGAAAAAUAUCCCUUCCACCAGUUUUCUUUUUCAUUAGAUUGAGGACCCAUGCAUUGUUAUAUAUGAACCGUGUUACUCUUUUAGCCUUUGCUAAAACCUCGUUCACUUCAUCGAUUCUUCCAAUUUCCUCAAGCAUUAUAUCGAUACACUGCAUUCCACAGGUGCUGCAGAAAAAGGUUUUAUACUUACUCAUCAAGAGCUUUCCUGCAGUUCUAUAACUAGUAUCUGUCACAAAAUUUACAAUAUUCUUGGGUCCAACUUCUUGAACAAUGCUAUCAAACAAAUUCAAAAGUGCUUCAGCAGAAUUUGUGAUGUCUGAUGCAUCAACAGAUUUGAGGAACAUGGUUCCUUUUGUGCAAUAAACAAAAAAGUUUAUGACUGUACGACCAGUUCUAUCCAUCCACCUAUCAACUAAUAUCGAACACCCAGUCACCUCCCAGGUAUUUUUCAGUUCUUCACAAUAUGCUCCUGCAUCUUGAGCUACUCUGUUCAACAACUUGCUCCUCAGAGAGUGAUAAGAAGGCAUCUUAUAACCAGGGCCCACAGCAGCAACAGCAUCAGCCAUCUGUUGGAAAAAACAAGAAUUUGCAGCAGAGAAUGGUAAACCAGCAUCAUACAUAAAUCUUGCAACGGCCAUAUCAGCUUCAUAGAUGCUCUCUUGUGAGGCAAAAUGCUGGCGCAAAGGCAGACCAACAACAGGUC