Search result

BaseInfo

ncRNA ID osa-miRf11167-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GAGCUCGACACGAGCUCGAG - NA
Stem-loop(if miRNA)  UA             C                  -  AGCCGAGCCUAUUG
C  AGCUUGAGCUCGA ACGAGCUCGAGCCGAGCU CG              C
|  ||||||||||||| |||||||||||||||||| ||              A
G  UCGAGCUCGAGCU UGCUCGAGCUUGGCUCGA CG              C
 GC             -                  A  GAUUUUCGAGCUUC
Stem-loop sequence CUAAGCUUGAGCUCGACACGAGCUCGAGCCGAGCUCGAGCCGAGCCUAUUGCACCUUCGAGCUUUUAGGCAAGCUCGGUUCGAGCUCGUUCGAGCUCGAGCUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015759367.1
ncRNA:20   GAGCUCGAGCACAGCUCGAG   1
  ||||*|||||*|||||||||
targets:847   CUCGCGCUCGCGUCGAGCUC   866

2.5 PREDICTED: Oryza sativa Japonica Group putative transporter arsB (LOC4348760), transcript variant X2, mRNA putative transporter arsB(LOC4348760) coding protein psRNATarget
XM_015759365.1
ncRNA:20   GAGCUCGAGCACAGCUCGAG   1
  ||||*|||||*|||||||||
targets:751   CUCGCGCUCGCGUCGAGCUC   770

2.5 PREDICTED: Oryza sativa Japonica Group putative transporter arsB (LOC4348760), transcript variant X1, mRNA putative transporter arsB(LOC4348760) coding protein psRNATarget
AK072242.1
ncRNA:20   GAGCUCGAGCACAGCUCGAG   1
  ||||*|||||*|||||||||
targets:743   CUCGCGCUCGCGUCGAGCUC   762

2.5 Oryza sativa Japonica Group cDNA clone:J013169G24, full insert sequence NA coding protein psRNATarget