ncRNA ID | osa-miRf11167-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GAGCUCGACACGAGCUCGAG - NA |
Stem-loop(if miRNA) |
 UA             C                  -  AGCCGAGCCUAUUG C  AGCUUGAGCUCGA ACGAGCUCGAGCCGAGCU CG              C |  ||||||||||||| |||||||||||||||||| ||              A G  UCGAGCUCGAGCU UGCUCGAGCUUGGCUCGA CG              C  GC             -                  A  GAUUUUCGAGCUUC |
Stem-loop sequence | CUAAGCUUGAGCUCGACACGAGCUCGAGCCGAGCUCGAGCCGAGCCUAUUGCACCUUCGAGCUUUUAGGCAAGCUCGGUUCGAGCUCGUUCGAGCUCGAGCUCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015759367.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group putative transporter arsB (LOC4348760), transcript variant X2, mRNA | putative transporter arsB(LOC4348760) | coding protein | psRNATarget | |||||||||
XM_015759365.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group putative transporter arsB (LOC4348760), transcript variant X1, mRNA | putative transporter arsB(LOC4348760) | coding protein | psRNATarget | |||||||||
AK072242.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013169G24, full insert sequence | NA | coding protein | psRNATarget |