Search result

BaseInfo

ncRNA ID novel_tse_miR41
Species Triadica sebifera
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 21
Mature sequence(if miRNA) 2633 - AGGAGAGAGAAAGGGAGAAGA - 2653
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      A  U  U
  UUCUCCCUUUCUCUCUCCUUCUUAUCAUCUUUCAGAUCUUUCUGCUCUUCUUAAUUUCCUUUAUAGAUUUCAAUUUCUUGAAUCCCAACAUCAAGAACCCGUUUCUUGAUUUCUCUCUGUCCAUCCGAAAUUAGCCAUAUAUACUGGAUUGAGGCUUUUCAGUCCAUUUCCAGUAUCAAAUUUACAGUUUUUUUCUAUAUUUUUGUUGGGGGUUUUUAAAGUUAAUCUUGAUGAUAAAUACUUUGAUCUUGAUGUUUGAAAUUCAUGUCUCCAAUUCUCAGUGAAAUCUUUCUUUCUGGGUGUAUGAUAAAUUCCACCUUCAGGCGCAGGACCCAUCUUGUUCAAUCAUUCUCAGUUGUUUUCCUCUACUGGCUAUAUUACGUUUCAUGAUUUUGGCUCCUAAAUCUGAUAUUUAGCCUAUAAUCUUAUAUAAUAAUAUCUAUAUAUAUAUAUAUAAUUAAAUAAUCUGCAUUUAUUUUGAGUAUAUUACUAGUUGGAUCCUGCUCUGUAUCUCUCUCUUGAAAUCUUGAUUGCUUUGAAAUUAAAUUUGUGGCUGAUUUAUUGAUUGGGUGAGAUGGGUUCCUCUAGCGGGACGAGUUCUGGGUCAAGUCUGGUACAAAACUCAGGCUCAGAAGAAGAUCUGCAGGCGUUAAUGGAUCAAAGGAAGAGGAAGAGGAUGAUAUCAAACAGGGAAUCAGCAAGGCGAUCAAGAAUGAGAAAGCAAAAGCAUCUGGAUGAUCUAAUGGCUCAGCUUGCUGAGCUGAGGAAAGAGAAUCAUCAGCUGAUAACAAGCAUCAACAUCACAACACAGCAUCUCUUGAAUGUGGAAUCUGAUAAUUCCAUACUCAGAGCUCAGGUGAGUGAGCUCACCCACAGAUUGCAGUCUCUGAAUGAGAUCAUCAACGUCUUAACAGCAAACGGCAACGUUUUUGAAGAUUCAAACACUGGUUUCAUCAGUGAACCAUUUGCUGAUUGCCUCUUCAACCCUUUGAAUAUGGGAUAUCUGAAUCAGCCUAUUACAGCCUCUUCUGAUUUUUUCCAAUACUAAAAACUAGCCAUCUUUAAGAGAUAGAGAGAGAGAGAAAGAGUUCCUGUUUUUUUCACUGGGUCUUAAUUUCAGUAUUAAAGCUUAAGUAAUGUGAUUAGGGGAGUGGUUAAAAAUUAAGAAAUAACAAUAAUUAAGGCACUUUGUUGAACAAAGUGAUGUGAUUAUUGGUCUGUAAAUCCUAGGGUAUUUGGUAUUUGUGUUGCAGUAGCUUUCUUUAAUUUCCCUUAUUAUCAAUUAUGUAAUGUUAUUUUGACUUUUUAGUUUCUGCAU UC AC A
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
  AAGAGGGAAAGAGAGAGGAAGAAUAGUAGAAAGUCUAGAAAGACGAGAAGAAUUAAAGGAAAUAUCUAAAGUUAAAGAACUUAGGGUUGUAGUUCUUGGGCAAAGAACUAAAGAGAGACAGGUAGGCUUUAAUCGGUAUAUAUGACCUAACUCCGAAAAGUCAGGUAAAGGUCAUAGUUUAAAUGUCAAAAAAAGAUAUAAAAACAACCCCCAAAAAUUUCAAUUAGAACUACUAUUUAUGAAACUAGAACUACAAACUUUAAGUACAGAGGUUAAGAGUCACUUUAGAAAGAAAGACCCACAUACUAUUUAAGGUGGAAGUCCGCGUCCUGGGUAGAACAAGUUAGUAAGAGUCAACAAAAGGAGAUGACCGAUAUAAUGCAAAGUACUAAAACCGAGGAUUUAGACUAUAAAUCGGAUAUUAGAAUAUAUUAUUAUAGAUAUAUAUAUAUAUAUUAAUUUAUUAGACGUAAAUAAAACUCAUAUAAUGAUCAACCUAGGACGAGACAUAGAGAGAGAACUUUAGAACUAACGAAACUUUAAUUUAAACACCGACUAAAUAACUAACCCACUCUACCCAAGGAGAUCGCCCUGCUCAAGACCCAGUUCAGACCAUGUUUUGAGUCCGAGUCUUCUUCUAGACGUCCGCAAUUACCUAGUUUCCUUCUCCUUCUCCUACUAUAGUUUGUCCCUUAGUCGUUCCGCUAGUUCUUACUCUUUCGUUUUCGUAGACCUACUAGAUUACCGAGUCGAACGACUCGACUCCUUUCUCUUAGUAGUCGACUAUUGUUCGUAGUUGUAGUGUUGUGUCGUAGAGAACUUACACCUUAGACUAUUAAGGUAUGAGUCUCGAGUCCACUCACUCGAGUGGGUGUCUAACGUCAGAGACUUACUCUAGUAGUUGCAGAAUUGUCGUUUGCCGUUGCAAAAACUUCUAAGUUUGUGACCAAAGUAGUCACUUGGUAAACGACUAACGGAGAAGUUGGGAAACUUAUACCCUAUAGACUUAGUCGGAUAAUGUCGGAGAAGACUAAAAAAGGUUAUGAUUUUUGAUCGGUAGAAAUUCUCUAUCUCUCUCUCUCUUUCUCAAGGACAAAAAAAGUGACCCAGAAUUAAAGUCAUAAUUUCGAAUUCAUUACACUAAUCCCCUCACCAAUUUUUAAUUCUUUAUUGUUAUUAAUUCCGUGAAACAACUUGUUUCACUACACUAAUAACCAGACAUUUAGGAUCCCAUAAACCAUAAACACAACGUCAUCGAAAGAAAUUAAAGGGAAUAAUAGUUAAUACAUUACAAUAAAACUGAAAAAUCAAAGACGUA AG UG G
AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      A  -  U
Stem-loop sequence UUCUCCCUUUCUCUCUCCUUCUUAUCAUCUUUCAGAUCUUUCUGCUCUUCUUAAUUUCCUUUAUAGAUUUCAAUUUCUUGAAUCCCAACAUCAAGAACCCGUUUCUUGAUUUCUCUCUGUCCAUCCGAAAUUAGCCAUAUAUACUGGAUUGAGGCUUUUCAGUCCAUUUCCAGUAUCAAAUUUACAGUUUUUUUCUAUAUUUUUGUUGGGGGUUUUUAAAGUUAAUCUUGAUGAUAAAUACUUUGAUCUUGAUGUUUGAAAUUCAUGUCUCCAAUUCUCAGUGAAAUCUUUCUUUCUGGGUGUAUGAUAAAUUCCACCUUCAGGCGCAGGACCCAUCUUGUUCAAUCAUUCUCAGUUGUUUUCCUCUACUGGCUAUAUUACGUUUCAUGAUUUUGGCUCCUAAAUCUGAUAUUUAGCCUAUAAUCUUAUAUAAUAAUAUCUAUAUAUAUAUAUAUAAUUAAAUAAUCUGCAUUUAUUUUGAGUAUAUUACUAGUUGGAUCCUGCUCUGUAUCUCUCUCUUGAAAUCUUGAUUGCUUUGAAAUUAAAUUUGUGGCUGAUUUAUUGAUUGGGUGAGAUGGGUUCCUCUAGCGGGACGAGUUCUGGGUCAAGUCUGGUACAAAACUCAGGCUCAGAAGAAGAUCUGCAGGCGUUAAUGGAUCAAAGGAAGAGGAAGAGGAUGAUAUCAAACAGGGAAUCAGCAAGGCGAUCAAGAAUGAGAAAGCAAAAGCAUCUGGAUGAUCUAAUGGCUCAGCUUGCUGAGCUGAGGAAAGAGAAUCAUCAGCUGAUAACAAGCAUCAACAUCACAACACAGCAUCUCUUGAAUGUGGAAUCUGAUAAUUCCAUACUCAGAGCUCAGGUGAGUGAGCUCACCCACAGAUUGCAGUCUCUGAAUGAGAUCAUCAACGUCUUAACAGCAAACGGCAACGUUUUUGAAGAUUCAAACACUGGUUUCAUCAGUGAACCAUUUGCUGAUUGCCUCUUCAACCCUUUGAAUAUGGGAUAUCUGAAUCAGCCUAUUACAGCCUCUUCUGAUUUUUUCCAAUACUAAAAACUAGCCAUCUUUAAGAGAUAGAGAGAGAGAGAAAGAGUUCCUGUUUUUUUCACUGGGUCUUAAUUUCAGUAUUAAAGCUUAAGUAAUGUGAUUAGGGGAGUGGUUAAAAAUUAAGAAAUAACAAUAAUUAAGGCACUUUGUUGAACAAAGUGAUGUGAUUAUUGGUCUGUAAAUCCUAGGGUAUUUGGUAUUUGUGUUGCAGUAGCUUUCUUUAAUUUCCCUUAUUAUCAAUUAUGUAAUGUUAUUUUGACUUUUUAGUUUCUGCAUAUCUACUAGUGUGAAAUGCAGAAACUAAAAAGUCAAAAUAACAUUACAUAAUUGAUAAUAAGGGAAAUUAAAGAAAGCUACUGCAACACAAAUACCAAAUACCCUAGGAUUUACAGACCAAUAAUCACAUCACUUUGUUCAACAAAGUGCCUUAAUUAUUGUUAUUUCUUAAUUUUUAACCACUCCCCUAAUCACAUUACUUAAGCUUUAAUACUGAAAUUAAGACCCAGUGAAAAAAACAGGAACUCUUUCUCUCUCUCUCUAUCUCUUAAAGAUGGCUAGUUUUUAGUAUUGGAAAAAAUCAGAAGAGGCUGUAAUAGGCUGAUUCAGAUAUCCCAUAUUCAAAGGGUUGAAGAGGCAAUCAGCAAAUGGUUCACUGAUGAAACCAGUGUUUGAAUCUUCAAAAACGUUGCCGUUUGCUGUUAAGACGUUGAUGAUCUCAUUCAGAGACUGCAAUCUGUGGGUGAGCUCACUCACCUGAGCUCUGAGUAUGGAAUUAUCAGAUUCCACAUUCAAGAGAUGCUGUGUUGUGAUGUUGAUGCUUGUUAUCAGCUGAUGAUUCUCUUUCCUCAGCUCAGCAAGCUGAGCCAUUAGAUCAUCCAGAUGCUUUUGCUUUCUCAUUCUUGAUCGCCUUGCUGAUUCCCUGUUUGAUAUCAUCCUCUUCCUCUUCCUUUGAUCCAUUAACGCCUGCAGAUCUUCUUCUGAGCCUGAGUUUUGUACCAGACUUGACCCAGAACUCGUCCCGCUAGAGGAACCCAUCUCACCCAAUCAAUAAAUCAGCCACAAAUUUAAUUUCAAAGCAAUCAAGAUUUCAAGAGAGAGAUACAGAGCAGGAUCCAACUAGUAAUAUACUCAAAAUAAAUGCAGAUUAUUUAAUUAUAUAUAUAUAUAUAGAUAUUAUUAUAUAAGAUUAUAGGCUAAAUAUCAGAUUUAGGAGCCAAAAUCAUGAAACGUAAUAUAGCCAGUAGAGGAAAACAACUGAGAAUGAUUGAACAAGAUGGGUCCUGCGCCUGAAGGUGGAAUUUAUCAUACACCCAGAAAGAAAGAUUUCACUGAGAAUUGGAGACAUGAAUUUCAAACAUCAAGAUCAAAGUAUUUAUCAUCAAGAUUAACUUUAAAAACCCCCAACAAAAAUAUAGAAAAAAACUGUAAAUUUGAUACUGGAAAUGGACUGAAAAGCCUCAAUCCAGUAUAUAUGGCUAAUUUCGGAUGGACAGAGAGAAAUCAAGAAACGGGUUCUUGAUGUUGGGAUUCAAGAAAUUGAAAUCUAUAAAGGAAAUUAAGAAGAGCAGAAAGAUCUGAAAGAUGAUAAGAAGGAGAGAGAAAGGGAGAAGA