ncRNA ID | novel_tse_miR41 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 21 |
Mature sequence(if miRNA) | 2633 - AGGAGAGAGAAAGGGAGAAGA - 2653 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      A  U  U   UUCUCCCUUUCUCUCUCCUUCUUAUCAUCUUUCAGAUCUUUCUGCUCUUCUUAAUUUCCUUUAUAGAUUUCAAUUUCUUGAAUCCCAACAUCAAGAACCCGUUUCUUGAUUUCUCUCUGUCCAUCCGAAAUUAGCCAUAUAUACUGGAUUGAGGCUUUUCAGUCCAUUUCCAGUAUCAAAUUUACAGUUUUUUUCUAUAUUUUUGUUGGGGGUUUUUAAAGUUAAUCUUGAUGAUAAAUACUUUGAUCUUGAUGUUUGAAAUUCAUGUCUCCAAUUCUCAGUGAAAUCUUUCUUUCUGGGUGUAUGAUAAAUUCCACCUUCAGGCGCAGGACCCAUCUUGUUCAAUCAUUCUCAGUUGUUUUCCUCUACUGGCUAUAUUACGUUUCAUGAUUUUGGCUCCUAAAUCUGAUAUUUAGCCUAUAAUCUUAUAUAAUAAUAUCUAUAUAUAUAUAUAUAAUUAAAUAAUCUGCAUUUAUUUUGAGUAUAUUACUAGUUGGAUCCUGCUCUGUAUCUCUCUCUUGAAAUCUUGAUUGCUUUGAAAUUAAAUUUGUGGCUGAUUUAUUGAUUGGGUGAGAUGGGUUCCUCUAGCGGGACGAGUUCUGGGUCAAGUCUGGUACAAAACUCAGGCUCAGAAGAAGAUCUGCAGGCGUUAAUGGAUCAAAGGAAGAGGAAGAGGAUGAUAUCAAACAGGGAAUCAGCAAGGCGAUCAAGAAUGAGAAAGCAAAAGCAUCUGGAUGAUCUAAUGGCUCAGCUUGCUGAGCUGAGGAAAGAGAAUCAUCAGCUGAUAACAAGCAUCAACAUCACAACACAGCAUCUCUUGAAUGUGGAAUCUGAUAAUUCCAUACUCAGAGCUCAGGUGAGUGAGCUCACCCACAGAUUGCAGUCUCUGAAUGAGAUCAUCAACGUCUUAACAGCAAACGGCAACGUUUUUGAAGAUUCAAACACUGGUUUCAUCAGUGAACCAUUUGCUGAUUGCCUCUUCAACCCUUUGAAUAUGGGAUAUCUGAAUCAGCCUAUUACAGCCUCUUCUGAUUUUUUCCAAUACUAAAAACUAGCCAUCUUUAAGAGAUAGAGAGAGAGAGAAAGAGUUCCUGUUUUUUUCACUGGGUCUUAAUUUCAGUAUUAAAGCUUAAGUAAUGUGAUUAGGGGAGUGGUUAAAAAUUAAGAAAUAACAAUAAUUAAGGCACUUUGUUGAACAAAGUGAUGUGAUUAUUGGUCUGUAAAUCCUAGGGUAUUUGGUAUUUGUGUUGCAGUAGCUUUCUUUAAUUUCCCUUAUUAUCAAUUAUGUAAUGUUAUUUUGACUUUUUAGUUUCUGCAU UC AC A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   AAGAGGGAAAGAGAGAGGAAGAAUAGUAGAAAGUCUAGAAAGACGAGAAGAAUUAAAGGAAAUAUCUAAAGUUAAAGAACUUAGGGUUGUAGUUCUUGGGCAAAGAACUAAAGAGAGACAGGUAGGCUUUAAUCGGUAUAUAUGACCUAACUCCGAAAAGUCAGGUAAAGGUCAUAGUUUAAAUGUCAAAAAAAGAUAUAAAAACAACCCCCAAAAAUUUCAAUUAGAACUACUAUUUAUGAAACUAGAACUACAAACUUUAAGUACAGAGGUUAAGAGUCACUUUAGAAAGAAAGACCCACAUACUAUUUAAGGUGGAAGUCCGCGUCCUGGGUAGAACAAGUUAGUAAGAGUCAACAAAAGGAGAUGACCGAUAUAAUGCAAAGUACUAAAACCGAGGAUUUAGACUAUAAAUCGGAUAUUAGAAUAUAUUAUUAUAGAUAUAUAUAUAUAUAUUAAUUUAUUAGACGUAAAUAAAACUCAUAUAAUGAUCAACCUAGGACGAGACAUAGAGAGAGAACUUUAGAACUAACGAAACUUUAAUUUAAACACCGACUAAAUAACUAACCCACUCUACCCAAGGAGAUCGCCCUGCUCAAGACCCAGUUCAGACCAUGUUUUGAGUCCGAGUCUUCUUCUAGACGUCCGCAAUUACCUAGUUUCCUUCUCCUUCUCCUACUAUAGUUUGUCCCUUAGUCGUUCCGCUAGUUCUUACUCUUUCGUUUUCGUAGACCUACUAGAUUACCGAGUCGAACGACUCGACUCCUUUCUCUUAGUAGUCGACUAUUGUUCGUAGUUGUAGUGUUGUGUCGUAGAGAACUUACACCUUAGACUAUUAAGGUAUGAGUCUCGAGUCCACUCACUCGAGUGGGUGUCUAACGUCAGAGACUUACUCUAGUAGUUGCAGAAUUGUCGUUUGCCGUUGCAAAAACUUCUAAGUUUGUGACCAAAGUAGUCACUUGGUAAACGACUAACGGAGAAGUUGGGAAACUUAUACCCUAUAGACUUAGUCGGAUAAUGUCGGAGAAGACUAAAAAAGGUUAUGAUUUUUGAUCGGUAGAAAUUCUCUAUCUCUCUCUCUCUUUCUCAAGGACAAAAAAAGUGACCCAGAAUUAAAGUCAUAAUUUCGAAUUCAUUACACUAAUCCCCUCACCAAUUUUUAAUUCUUUAUUGUUAUUAAUUCCGUGAAACAACUUGUUUCACUACACUAAUAACCAGACAUUUAGGAUCCCAUAAACCAUAAACACAACGUCAUCGAAAGAAAUUAAAGGGAAUAAUAGUUAAUACAUUACAAUAAAACUGAAAAAUCAAAGACGUA AG UG G AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      A  -  U |
Stem-loop sequence | UUCUCCCUUUCUCUCUCCUUCUUAUCAUCUUUCAGAUCUUUCUGCUCUUCUUAAUUUCCUUUAUAGAUUUCAAUUUCUUGAAUCCCAACAUCAAGAACCCGUUUCUUGAUUUCUCUCUGUCCAUCCGAAAUUAGCCAUAUAUACUGGAUUGAGGCUUUUCAGUCCAUUUCCAGUAUCAAAUUUACAGUUUUUUUCUAUAUUUUUGUUGGGGGUUUUUAAAGUUAAUCUUGAUGAUAAAUACUUUGAUCUUGAUGUUUGAAAUUCAUGUCUCCAAUUCUCAGUGAAAUCUUUCUUUCUGGGUGUAUGAUAAAUUCCACCUUCAGGCGCAGGACCCAUCUUGUUCAAUCAUUCUCAGUUGUUUUCCUCUACUGGCUAUAUUACGUUUCAUGAUUUUGGCUCCUAAAUCUGAUAUUUAGCCUAUAAUCUUAUAUAAUAAUAUCUAUAUAUAUAUAUAUAAUUAAAUAAUCUGCAUUUAUUUUGAGUAUAUUACUAGUUGGAUCCUGCUCUGUAUCUCUCUCUUGAAAUCUUGAUUGCUUUGAAAUUAAAUUUGUGGCUGAUUUAUUGAUUGGGUGAGAUGGGUUCCUCUAGCGGGACGAGUUCUGGGUCAAGUCUGGUACAAAACUCAGGCUCAGAAGAAGAUCUGCAGGCGUUAAUGGAUCAAAGGAAGAGGAAGAGGAUGAUAUCAAACAGGGAAUCAGCAAGGCGAUCAAGAAUGAGAAAGCAAAAGCAUCUGGAUGAUCUAAUGGCUCAGCUUGCUGAGCUGAGGAAAGAGAAUCAUCAGCUGAUAACAAGCAUCAACAUCACAACACAGCAUCUCUUGAAUGUGGAAUCUGAUAAUUCCAUACUCAGAGCUCAGGUGAGUGAGCUCACCCACAGAUUGCAGUCUCUGAAUGAGAUCAUCAACGUCUUAACAGCAAACGGCAACGUUUUUGAAGAUUCAAACACUGGUUUCAUCAGUGAACCAUUUGCUGAUUGCCUCUUCAACCCUUUGAAUAUGGGAUAUCUGAAUCAGCCUAUUACAGCCUCUUCUGAUUUUUUCCAAUACUAAAAACUAGCCAUCUUUAAGAGAUAGAGAGAGAGAGAAAGAGUUCCUGUUUUUUUCACUGGGUCUUAAUUUCAGUAUUAAAGCUUAAGUAAUGUGAUUAGGGGAGUGGUUAAAAAUUAAGAAAUAACAAUAAUUAAGGCACUUUGUUGAACAAAGUGAUGUGAUUAUUGGUCUGUAAAUCCUAGGGUAUUUGGUAUUUGUGUUGCAGUAGCUUUCUUUAAUUUCCCUUAUUAUCAAUUAUGUAAUGUUAUUUUGACUUUUUAGUUUCUGCAUAUCUACUAGUGUGAAAUGCAGAAACUAAAAAGUCAAAAUAACAUUACAUAAUUGAUAAUAAGGGAAAUUAAAGAAAGCUACUGCAACACAAAUACCAAAUACCCUAGGAUUUACAGACCAAUAAUCACAUCACUUUGUUCAACAAAGUGCCUUAAUUAUUGUUAUUUCUUAAUUUUUAACCACUCCCCUAAUCACAUUACUUAAGCUUUAAUACUGAAAUUAAGACCCAGUGAAAAAAACAGGAACUCUUUCUCUCUCUCUCUAUCUCUUAAAGAUGGCUAGUUUUUAGUAUUGGAAAAAAUCAGAAGAGGCUGUAAUAGGCUGAUUCAGAUAUCCCAUAUUCAAAGGGUUGAAGAGGCAAUCAGCAAAUGGUUCACUGAUGAAACCAGUGUUUGAAUCUUCAAAAACGUUGCCGUUUGCUGUUAAGACGUUGAUGAUCUCAUUCAGAGACUGCAAUCUGUGGGUGAGCUCACUCACCUGAGCUCUGAGUAUGGAAUUAUCAGAUUCCACAUUCAAGAGAUGCUGUGUUGUGAUGUUGAUGCUUGUUAUCAGCUGAUGAUUCUCUUUCCUCAGCUCAGCAAGCUGAGCCAUUAGAUCAUCCAGAUGCUUUUGCUUUCUCAUUCUUGAUCGCCUUGCUGAUUCCCUGUUUGAUAUCAUCCUCUUCCUCUUCCUUUGAUCCAUUAACGCCUGCAGAUCUUCUUCUGAGCCUGAGUUUUGUACCAGACUUGACCCAGAACUCGUCCCGCUAGAGGAACCCAUCUCACCCAAUCAAUAAAUCAGCCACAAAUUUAAUUUCAAAGCAAUCAAGAUUUCAAGAGAGAGAUACAGAGCAGGAUCCAACUAGUAAUAUACUCAAAAUAAAUGCAGAUUAUUUAAUUAUAUAUAUAUAUAUAGAUAUUAUUAUAUAAGAUUAUAGGCUAAAUAUCAGAUUUAGGAGCCAAAAUCAUGAAACGUAAUAUAGCCAGUAGAGGAAAACAACUGAGAAUGAUUGAACAAGAUGGGUCCUGCGCCUGAAGGUGGAAUUUAUCAUACACCCAGAAAGAAAGAUUUCACUGAGAAUUGGAGACAUGAAUUUCAAACAUCAAGAUCAAAGUAUUUAUCAUCAAGAUUAACUUUAAAAACCCCCAACAAAAAUAUAGAAAAAAACUGUAAAUUUGAUACUGGAAAUGGACUGAAAAGCCUCAAUCCAGUAUAUAUGGCUAAUUUCGGAUGGACAGAGAGAAAUCAAGAAACGGGUUCUUGAUGUUGGGAUUCAAGAAAUUGAAAUCUAUAAAGGAAAUUAAGAAGAGCAGAAAGAUCUGAAAGAUGAUAAGAAGGAGAGAGAAAGGGAGAAGA |